| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3076 |
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| Symbol | |
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| ID | 3965419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3929363 |
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| End bp | 3929803 |
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| Gene Length | 441 bp |
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| Protein Length | 146 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637922173 |
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| Product | hypothetical protein |
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| Protein accession | YP_528545 |
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| Protein GI | 90022718 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4319] Ketosteroid isomerase homolog |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.499668 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTGAAA AACGCGAACC ATTTTTAATG ATTCTAGATC TGTACAAAGC CGCTGTCTTC
ACGAAAGACG TTGATGCATT TGTCAATCTT TACCACAACG ATATACACAT ATTCGACATG
TGGGGCACGT GGTCCACACG CGGATTAGAT TCCTGGAGAG GTATGGCAAC GGAGTGGTTT
TCTTCACTCG AAGAAGAGCG AGTAATGGTT GGTATTTCAG ATGCTCAATC GATGGTATAT
GAGGAACTCG CTTTTGGGCA TGCAGTCCTT ACCTATACGG CAATCTCACC TGAAGGGAAG
GAATTGCGAG CACTGAGTAA CCGCTTAACA ATGATACTAA AGTACGATGG AAGCTCGTGG
AAGATACTCC ATGAGCACAC ATCGTCACCG GTTGACCATA GTTCTCTGAA AGCTATTCTG
CAATACCCTG GAAATGGCTA A
|
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| Protein sequence | MTEKREPFLM ILDLYKAAVF TKDVDAFVNL YHNDIHIFDM WGTWSTRGLD SWRGMATEWF
SSLEEERVMV GISDAQSMVY EELAFGHAVL TYTAISPEGK ELRALSNRLT MILKYDGSSW
KILHEHTSSP VDHSSLKAIL QYPGNG
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