21 homologs were found in PanDaTox collection
for query gene SERP1289 on replicon NC_002976
Organism: Staphylococcus epidermidis RP62A



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_002976  SERP1289  HAD superfamily hydrolase  100 
 
 		 374 aa  757    Staphylococcus epidermidis RP62A  Bacteria  normal  0.622436  n/a   
 
 
-
 
NC_009487  SaurJH9_1780  hypothetical protein  55.08 
 
 		 376 aa  401  1e-111  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_009632  SaurJH1_1815  hypothetical protein  55.08 
 
 		 376 aa  401  1e-111  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013205  Aaci_1233  Haloacid dehalogenase domain protein hydrolase  36.46 
 
 		 375 aa  219  6e-56  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  decreased coverage  0.00126511  n/a   
 
 
-
 
NC_013202  Hmuk_0305  HAD superfamily (subfamily IA) hydrolase, TIGR01548  27.59 
 
 		 293 aa  59.7  0.00000008  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.741763  normal  1 
 
 
-
 
NC_013922  Nmag_1555  HAD superfamily (subfamily IA) hydrolase, TIGR01548  27.27 
 
 		 324 aa  59.3  0.0000001  Natrialba magadii ATCC 43099  Archaea  normal  1  n/a   
 
 
-
 
NC_013158  Huta_0328  HAD superfamily (subfamily IA) hydrolase, TIGR01548  25.37 
 
 		 299 aa  53.9  0.000004  Halorhabdus utahensis DSM 12940  Archaea  normal  1  n/a   
 
 
-
 
NC_012029  Hlac_0335  HAD superfamily (subfamily IA) hydrolase, TIGR01548  25.85 
 
 		 287 aa  52  0.00002  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  1  normal  0.0232711 
 
 
-
 
NC_013743  Htur_3499  HAD superfamily (subfamily IA) hydrolase, TIGR01548  26.98 
 
 		 293 aa  51.2  0.00003  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_008577  Shewana3_2565  HAD family hydrolase  27.38 
 
 		 244 aa  49.3  0.0001  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00000244874  normal  1 
 
 
-
 
NC_013501  Rmar_2311  HAD superfamily (subfamily IA) hydrolase, TIGR01548  23.83 
 
 		 246 aa  49.3  0.0001  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK4527  phosphoglycolate phosphatase  31.45 
 
 		 216 aa  47.4  0.0004  Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_008321  Shewmr4_2403  HAD family hydrolase  27.67 
 
 		 248 aa  46.2  0.0008  Shewanella sp. MR-4  Bacteria  hitchhiker  0.000000854479  normal  1 
 
 
-
 
NC_008322  Shewmr7_2473  HAD family hydrolase  26.04 
 
 		 248 aa  45.1  0.002  Shewanella sp. MR-7  Bacteria  hitchhiker  0.000591891  hitchhiker  0.00615598 
 
 
-
 
NC_013926  Aboo_0569  Haloacid dehalogenase domain protein hydrolase  25.93 
 
 		 213 aa  43.9  0.004  Aciduliprofundum boonei T469  Archaea  normal  0.895889  n/a   
 
 
-
 
NC_013595  Sros_5624  HAD family hydrolase  31.06 
 
 		 228 aa  43.5  0.005  Streptosporangium roseum DSM 43021  Bacteria  normal  0.147818  normal  0.407625 
 
 
-
 
NC_010623  Bphy_5294  HAD family hydrolase  27.63 
 
 		 224 aa  43.5  0.006  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.08015 
 
 
-
 
NC_013093  Amir_3289  AHBA synthesis associated protein  27.52 
 
 		 264 aa  43.1  0.007  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_009665  Shew185_1709  HAD family hydrolase  27.22 
 
 		 238 aa  43.5  0.007  Shewanella baltica OS185  Bacteria  hitchhiker  0.00000000621435  n/a   
 
 
-
 
NC_009438  Sputcn32_1575  HAD family hydrolase  27.67 
 
 		 238 aa  43.5  0.007  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.000310395  n/a   
 
 
-
 
NC_008345  Sfri_1492  HAD family hydrolase  24.53 
 
 		 217 aa  42.7  0.01  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.210059  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>