Gene Huta_0328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_0328 
Symbol 
ID8382592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand- 
Start bp315550 
End bp316449 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content63% 
IMG OID644971387 
ProductHAD superfamily (subfamily IA) hydrolase, TIGR01548 
Protein accessionYP_003129248 
Protein GI257051415 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01548] haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGTCAG ACGCGGTCGT ACTTGACGTG GACGGCGTGC TGGTGGACGT CGCCGACTCG 
TATCGGCGGG CCGTTGTCGA CACTGTGGCG CGCATCCACG GCGAAACCAT CTCACGATCC 
ACGCTGCAGG CGTTCAAGGA CGCGGGGGGG TTCAACAACG ACTGGGAGTT GACTGACGCG 
CTCGCGTTGT ACGTGCTCGC CCGGAGCGAA GGATTCGACC GTTGCGTCGA GGGATTTACT 
GATCGGATTG CCGCCTCCGG GGGCGGATTC TCCGGGGCGC GGTCCGTCGT CGACGACGAG 
ATGGACGCCG CCGCGCGCGA ACGAATCTAT GCGGCACTCG ATCGGGAACA GCTCCGTGAG 
GTGTTTCAGC AACTGTATCT TGGCAGCGAC AAATATCGGG AGATCGAGGG GAGCGAACCG 
ACGCTCTCGG AAGCCGGCTA TATCCACGAC GAGACCGTCC TGGTCGATCG GTCGACTCTC 
GAGACGCTGC TTGCGAACTT CGAGGTTGGT GTTCTGACTG GGCGACCAGC GGCGGAGGCC 
GACATCGCCA TGGATCGCGT CGGATTGGAC ATTCCCGCGG ACCACCGCTT TACCATGGAC 
GACTGGGACG CGGGCAAGCC GGACCCTGAC GCACTCGTGA CGCTAGCCGA ACGCTTCGAT 
GCCGACACCG TCACTTTCGC CGGTGATACG CTGGATGACG TTCGCACCGC CGTCAACGCT 
GCTGACACCG ATTCTGACCG GACCTATCAC GGTATCGGCG TCCTGACCGG TGGACTCACA 
AGCGAATCGG GCCGGGAGAA GTTCGAGCAA GCAGGGGCCG ACGCCGTCGT CGAGTCGGTC 
AACGACCTGC CGGAACTCCT CGAAGGGGGC GAAAACCGTG CGGGATCGCA GGGGGCTTAA
 
Protein sequence
MQSDAVVLDV DGVLVDVADS YRRAVVDTVA RIHGETISRS TLQAFKDAGG FNNDWELTDA 
LALYVLARSE GFDRCVEGFT DRIAASGGGF SGARSVVDDE MDAAARERIY AALDREQLRE 
VFQQLYLGSD KYREIEGSEP TLSEAGYIHD ETVLVDRSTL ETLLANFEVG VLTGRPAAEA 
DIAMDRVGLD IPADHRFTMD DWDAGKPDPD ALVTLAERFD ADTVTFAGDT LDDVRTAVNA 
ADTDSDRTYH GIGVLTGGLT SESGREKFEQ AGADAVVESV NDLPELLEGG ENRAGSQGA