9 homologs were found in PanDaTox collection
for query gene Rsph17029_2053 on replicon NC_009049
Organism: Rhodobacter sphaeroides ATCC 17029



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009049  Rsph17029_2053  hypothetical protein  100 
 
 
185 aa  368  1e-101  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.678498  normal 
 
 
-
 
NC_007493  RSP_0400  hypothetical protein  99.46 
 
 
185 aa  366  1e-100  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_0837  hypothetical protein  45.24 
 
 
181 aa  162  2.0000000000000002e-39  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.21812  normal  0.663687 
 
 
-
 
NC_008044  TM1040_2152  TadE-like  40.96 
 
 
182 aa  132  1.9999999999999998e-30  Ruegeria sp. TM1040  Bacteria  normal  0.975839  normal  0.0763338 
 
 
-
 
NC_007802  Jann_3442  hypothetical protein  38.33 
 
 
186 aa  130  1.0000000000000001e-29  Jannaschia sp. CCS1  Bacteria  normal  0.0907712  normal 
 
 
-
 
NC_009952  Dshi_2268  hypothetical protein  41.72 
 
 
174 aa  130  1.0000000000000001e-29  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.771496 
 
 
-
 
NC_011004  Rpal_4196  TadE family protein  29.7 
 
 
177 aa  53.9  0.000001  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.394929  n/a   
 
 
-
 
NC_007406  Nwi_0306  Flp pilus assembly protein TadG  28.82 
 
 
186 aa  50.1  0.00002  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_0396  TadE-like  26.88 
 
 
189 aa  47.4  0.0001  Nitrobacter hamburgensis X14  Bacteria  normal  0.385276  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>