11 homologs were found in PanDaTox collection
for query gene Rpic12D_4743 on replicon NC_012855
Organism: Ralstonia pickettii 12D



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012855  Rpic12D_4743  hypothetical protein  100 
 
 		 212 aa  429  1e-119  Ralstonia pickettii 12D  Bacteria  normal  1  normal  0.307237 
 
 
-
 
NC_007901  Rfer_4264  hypothetical protein  35.47 
 
 		 209 aa  136  2e-31  Rhodoferax ferrireducens T118  Bacteria  n/a    n/a   
 
 
-
 
NC_007950  Bpro_5469  hypothetical protein  35.38 
 
 		 214 aa  129  4.0000000000000003e-29  Polaromonas sp. JS666  Bacteria  normal  1  normal  0.0415532 
 
 
-
 
NC_007949  Bpro_5225  hypothetical protein  30.23 
 
 		 212 aa  105  4e-22  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010553  BamMC406_6798  hypothetical protein  26.34 
 
 		 201 aa  65.5  0.0000000005  Burkholderia ambifaria MC40-6  Bacteria  normal  0.635417  normal  0.58588 
 
 
-
 
NC_007972  Rmet_6312  hypothetical protein  22.4 
 
 		 205 aa  58.9  0.00000006  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009140  SNSL254_pSN254_0068  putative type IV conjugative transfer system coupling factor  21.79 
 
 		 209 aa  58.5  0.00000006  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010087  Bmul_5616  hypothetical protein  25.13 
 
 		 201 aa  57.4  0.0000002  Burkholderia multivorans ATCC 17616  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010682  Rpic_1515  hypothetical protein  19.79 
 
 		 205 aa  46.6  0.0003  Ralstonia pickettii 12J  Bacteria  normal  0.456922  normal  1 
 
 
-
 
NC_012849  Rpic12D_5180  hypothetical protein  19.79 
 
 		 205 aa  46.6  0.0003  Ralstonia pickettii 12D  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008573  Shewana3_4263  hypothetical protein  21.57 
 
 		 211 aa  41.6  0.009  Shewanella sp. ANA-3  Bacteria  unclonable  0.000000000478781  normal  0.218564 
 
 
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