9 homologs were found in PanDaTox collection
for query gene SNSL254_pSN254_0068 on replicon NC_009140
Organism: Salmonella enterica subsp. enterica serovar Newport str. SL254



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009140  SNSL254_pSN254_0068  putative type IV conjugative transfer system coupling factor  100 
 
 
209 aa  429  1e-119  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_012855  Rpic12D_4743  hypothetical protein  21.46 
 
 
212 aa  61.2  0.000000009  Ralstonia pickettii 12D  Bacteria  normal  normal  0.307237 
 
 
-
 
NC_007972  Rmet_6312  hypothetical protein  27.59 
 
 
205 aa  47.4  0.0001  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007949  Bpro_5225  hypothetical protein  23.83 
 
 
212 aa  47  0.0002  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_3306  hypothetical protein  23.08 
 
 
222 aa  44.3  0.001  Pseudomonas putida W619  Bacteria  normal  0.878573  normal 
 
 
-
 
NC_010553  BamMC406_6798  hypothetical protein  20 
 
 
201 aa  44.3  0.001  Burkholderia ambifaria MC40-6  Bacteria  normal  0.635417  normal  0.58588 
 
 
-
 
NC_010682  Rpic_1515  hypothetical protein  24.69 
 
 
205 aa  43.5  0.002  Ralstonia pickettii 12J  Bacteria  normal  0.456922  normal 
 
 
-
 
NC_012849  Rpic12D_5180  hypothetical protein  24.69 
 
 
205 aa  43.5  0.002  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_013930  TK90_2816  hypothetical protein  21.95 
 
 
217 aa  43.9  0.002  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.572858 
 
 
-
 
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