11 homologs were found in PanDaTox collection
for query gene Rpic_1515 on replicon NC_010682
Organism: Ralstonia pickettii 12J



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010682  Rpic_1515  hypothetical protein  100 
 
 
205 aa  408  1e-113  Ralstonia pickettii 12J  Bacteria  normal  0.456922  normal 
 
 
-
 
NC_012849  Rpic12D_5180  hypothetical protein  100 
 
 
205 aa  408  1e-113  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007972  Rmet_6312  hypothetical protein  49.76 
 
 
205 aa  209  2e-53  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010087  Bmul_5616  hypothetical protein  36.14 
 
 
201 aa  150  1e-35  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010553  BamMC406_6798  hypothetical protein  36.63 
 
 
201 aa  143  2e-33  Burkholderia ambifaria MC40-6  Bacteria  normal  0.635417  normal  0.58588 
 
 
-
 
NC_008757  Pnap_4332  hypothetical protein  25.84 
 
 
211 aa  66.2  0.0000000003  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.608213  normal  0.984204 
 
 
-
 
NC_008786  Veis_3749  hypothetical protein  25.24 
 
 
210 aa  47.8  0.0001  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.900443  normal  0.697886 
 
 
-
 
NC_012855  Rpic12D_4743  hypothetical protein  19.79 
 
 
212 aa  46.6  0.0003  Ralstonia pickettii 12D  Bacteria  normal  normal  0.307237 
 
 
-
 
NC_007901  Rfer_4264  hypothetical protein  27.27 
 
 
209 aa  45.4  0.0006  Rhodoferax ferrireducens T118  Bacteria  n/a    n/a   
 
 
-
 
NC_009140  SNSL254_pSN254_0068  putative type IV conjugative transfer system coupling factor  25.16 
 
 
209 aa  42.7  0.003  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_013930  TK90_2816  hypothetical protein  25.33 
 
 
217 aa  43.1  0.003  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.572858 
 
 
-
 
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