Gene Rpic12D_5180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_5180 
Symbol 
ID8007760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012849 
Strand
Start bp79665 
End bp80282 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content63% 
IMG OID644822392 
Producthypothetical protein 
Protein accessionYP_002973652 
Protein GI241114177 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACA GTCGCTTCGC CTCGCACCTT CGCCTGTGGA CGCTTGTTGC CCCGATCATG 
CTCGCGGTCG GCTGTCCCTT CCTCGAAGGC GATACCACAT TCGAGATTTC CGACGCCGAA
CTGGCGTCGG TTGAACTGAA CCTGGGAGAC ACCGCGGCGA CGCGGGCTGC GGATCGGACC
AACACGCAGT TTCGGCACTG GTTCGTCGAG TCTGGCGCCA TGAAGGCGTG GACGTCCACG
CTGCCGAACA GCACCGATAT CTCCGACGCT GGCGCGACGG ACATGAGCAA CGCTTGGCTG
CGGCACTTCT GGATGTCCAT CTACCGAGGC ATCTTCCGCG CGAACGTCGC TCTCTCGTGG
GCATTCGGTG CCTTCGTCTT CGGCATGGCC ATGATGAACG ACGGTGCCGT CTCGCGCCGA
ATCAAAGCAG CTGCTGCCGG GTTCGCAAGC CCCGTTGCTT TTCACGTGGC GGCACACGCC
ACGGTCATCA CCCTGGGATT GGGCACGTCC GCCCTCCTGT TTCCATTTTC CTTGAACACG
ATGTGGTGGT CAGTCGGCGC GCTGGTGTTG GGCGTGCTCG GCTGGCGGAT GGCTGCATCG
TTTCACGTAG GCCGATAG
 
Protein sequence
MADSRFASHL RLWTLVAPIM LAVGCPFLEG DTTFEISDAE LASVELNLGD TAATRAADRT 
NTQFRHWFVE SGAMKAWTST LPNSTDISDA GATDMSNAWL RHFWMSIYRG IFRANVALSW
AFGAFVFGMA MMNDGAVSRR IKAAAAGFAS PVAFHVAAHA TVITLGLGTS ALLFPFSLNT
MWWSVGALVL GVLGWRMAAS FHVGR