7 homologs were found in PanDaTox collection
for query gene Rpic12D_0236 on replicon NC_012856
Organism: Ralstonia pickettii 12D



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012856  Rpic12D_0236  hypothetical protein  100 
 
 
60 aa  125  3e-28  Ralstonia pickettii 12D  Bacteria  normal  normal  0.0147111 
 
 
-
 
NC_003295  RSc0361  hypothetical protein  63.93 
 
 
171 aa  72.4  0.000000000002  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.782574 
 
 
-
 
NC_006348  BMA3198  hypothetical protein  38.33 
 
 
171 aa  43.1  0.001  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0671  hypothetical protein  38.33 
 
 
171 aa  43.1  0.001  Burkholderia pseudomallei 1710b  Bacteria  normal  0.286215  n/a   
 
 
-
 
NC_007973  Rmet_0260  hypothetical protein  35.94 
 
 
171 aa  42.7  0.001  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.749428 
 
 
-
 
NC_007651  BTH_I0425  hypothetical protein  38.33 
 
 
171 aa  42.7  0.002  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A0313  transmembrane protein  40.62 
 
 
169 aa  42  0.003  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
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