Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0361 |
Symbol | |
ID | 1219164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 391235 |
End bp | 391750 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637236718 |
Product | hypothetical protein |
Protein accession | NP_518482 |
Protein GI | 17545080 |
COG category | [S] Function unknown |
COG ID | [COG5488] Integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.782574 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATGACA TTGGAATCGC GCTCCAGCCA GCGTGCGGCG CATCCAGCAT CCCGGAACCG CCGCGGAAGA TCTGGCTCAT GAAGCGAAAC TGCTCGCTTT CACCCCGCCA GGTCGGCTGG TTCTACCTCT CGATTGTCAT CCTCTCGTTC GTGATCGCTT CGTTCTTTGC GTGGCAAGGG GCGTGGTTCG TGCTGCCTTT CTCGGGGCTG GAAGTCGCGG CCCTCGGATG GGCCTTGCTG TACTATGCCC GGCACGCCTC CGATTACGAG CGCATCGAGC TGGATGACGA TGCGCTGGTG ATCGAACAGG TCAACGCTTG CAGGCGGGTG CGCCACGTGC TCAACCCGCA CTGGGTGCAC GTGGAAGTGG TAGAGCCGTT GCAGGAGCAG GTCGCGCTCT GTTCGAGCGG GCGCGTCGTG CAGGTAGGGC GGTTTCTTGA CCCTGCCGGT CGTCGCCGGC TGGCGGATGA GCTTTCCCGG TGTCTGGGAC GCGGGCAACC AACCCATGTT CCATGA
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Protein sequence | MHDIGIALQP ACGASSIPEP PRKIWLMKRN CSLSPRQVGW FYLSIVILSF VIASFFAWQG AWFVLPFSGL EVAALGWALL YYARHASDYE RIELDDDALV IEQVNACRRV RHVLNPHWVH VEVVEPLQEQ VALCSSGRVV QVGRFLDPAG RRRLADELSR CLGRGQPTHV P
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