More than 300 homologs were found in PanDaTox collection
for query gene Rmet_0246 on replicon NC_007973
Organism: Cupriavidus metallidurans CH34



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_003295  RSc0348  phosphoenolpyruvate-protein phosphotransferase transmembrane  79.52 
 
 
586 aa  882    Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.0117404 
 
 
-
 
NC_008786  Veis_1282  phosphoenolpyruvate-protein phosphotransferase  61.37 
 
 
592 aa  665    Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.889081  normal 
 
 
-
 
NC_008781  Pnap_0239  phosphoenolpyruvate-protein phosphotransferase  60.03 
 
 
591 aa  652    Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.390197  normal  0.455479 
 
 
-
 
NC_009080  BMA10247_2834  phosphoenolpyruvate-protein phosphotransferase  69.4 
 
 
596 aa  780    Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_2777  phosphoenolpyruvate-protein phosphotransferase  68.95 
 
 
591 aa  798    Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_0409  phosphoenolpyruvate-protein phosphotransferase  59.83 
 
 
591 aa  644    Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4896  phosphoenolpyruvate-protein phosphotransferase  61.37 
 
 
598 aa  687    Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0297  phosphoenolpyruvate--protein phosphotransferase  61.09 
 
 
589 aa  640    Acidovorax sp. JS42  Bacteria  normal  hitchhiker  0.000342223 
 
 
-
 
NC_006348  BMA3211  phosphoenolpyruvate-protein phosphotransferase  69.74 
 
 
590 aa  783    Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_010531  Pnec_1656  phosphoenolpyruvate-protein phosphotransferase  59.01 
 
 
583 aa  662    Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal  0.619102 
 
 
-
 
NC_010524  Lcho_1033  phosphoenolpyruvate-protein phosphotransferase  59.45 
 
 
603 aa  668    Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010682  Rpic_0204  phosphoenolpyruvate-protein phosphotransferase  79.28 
 
 
583 aa  860    Ralstonia pickettii 12J  Bacteria  normal  normal  0.214502 
 
 
-
 
NC_007347  Reut_A0297  phosphoenolpyruvate--protein phosphotransferase  90.57 
 
 
586 aa  1030    Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0658  phosphoenolpyruvate-protein phosphotransferase  69.57 
 
 
590 aa  782    Burkholderia pseudomallei 1710b  Bacteria  normal  0.536358  n/a   
 
 
-
 
NC_007510  Bcep18194_A6189  phosphoenolpyruvate--protein phosphotransferase  69.52 
 
 
592 aa  800    Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_008785  BMASAVP1_A0185  phosphoenolpyruvate-protein phosphotransferase  69.4 
 
 
596 aa  780    Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1407  phosphoenolpyruvate-protein phosphotransferase  69.4 
 
 
596 aa  780    Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I0413  phosphoenolpyruvate-protein phosphotransferase  69.57 
 
 
590 aa  783    Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0603  phosphoenolpyruvate-protein phosphotransferase  60.65 
 
 
591 aa  700    Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_0299  phosphoenolpyruvate--protein phosphotransferase  60.27 
 
 
600 aa  682    Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A4184  phosphoenolpyruvate--protein phosphotransferase  70.99 
 
 
601 aa  803    Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009076  BURPS1106A_0493  phosphoenolpyruvate-protein phosphotransferase  69.4 
 
 
596 aa  780    Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0326  phosphoenolpyruvate--protein phosphotransferase  62.59 
 
 
611 aa  661    Methylibium petroleiphilum PM1  Bacteria  hitchhiker  0.00077396  normal  0.0251738 
 
 
-
 
NC_007973  Rmet_0246  phosphoenolpyruvate--protein phosphotransferase  100 
 
 
585 aa  1165    Cupriavidus metallidurans CH34  Bacteria  normal  0.331239  normal 
 
 
-
 
NC_008752  Aave_0354  phosphoenolpyruvate--protein phosphotransferase  60.14 
 
 
592 aa  647    Acidovorax citrulli AAC00-1  Bacteria  normal  hitchhiker  0.00159847 
 
 
-
 
NC_008060  Bcen_2246  phosphoenolpyruvate-protein phosphotransferase  68.94 
 
 
632 aa  785    Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_0531  phosphoenolpyruvate-protein phosphotransferase  70.53 
 
 
582 aa  814    Burkholderia phytofirmans PsJN  Bacteria  normal  0.560234  normal 
 
 
-
 
NC_011992  Dtpsy_0292  phosphoenolpyruvate-protein phosphotransferase  60.75 
 
 
589 aa  637    Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_0474  phosphoenolpyruvate-protein phosphotransferase  69.4 
 
 
596 aa  781    Burkholderia pseudomallei 668  Bacteria  normal  0.368483  n/a   
 
 
-
 
NC_010508  Bcenmc03_2871  phosphoenolpyruvate-protein phosphotransferase  68.94 
 
 
592 aa  784    Burkholderia cenocepacia MC0-3  Bacteria  normal  0.654015  normal  0.294713 
 
 
-
 
NC_010084  Bmul_0443  phosphoenolpyruvate-protein phosphotransferase  69.81 
 
 
627 aa  796    Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_008390  Bamb_2915  phosphoenolpyruvate-protein phosphotransferase  68.78 
 
 
593 aa  797    Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_0262  phosphoenolpyruvate-protein phosphotransferase  69.32 
 
 
580 aa  814    Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009379  Pnuc_1951  phosphoenolpyruvate-protein phosphotransferase  59.35 
 
 
583 aa  665    Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_2860  phosphoenolpyruvate-protein phosphotransferase  68.94 
 
 
592 aa  785    Burkholderia cenocepacia HI2424  Bacteria  normal  0.814434  n/a   
 
 
-
 
NC_012856  Rpic12D_0223  phosphoenolpyruvate-protein phosphotransferase  79.28 
 
 
583 aa  858    Ralstonia pickettii 12D  Bacteria  normal  hitchhiker  0.000337808 
 
 
-
 
NC_007614  Nmul_A0220  phosphoenolpyruvate-protein phosphotransferase  56.14 
 
 
575 aa  629  1e-179  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_0467  phosphoenolpyruvate-protein phosphotransferase  55.12 
 
 
576 aa  594  1e-168  Thauera sp. MZ1T  Bacteria  normal  0.688262  n/a   
 
 
-
 
NC_007298  Daro_4084  phosphoenolpyruvate--protein phosphotransferase  53.41 
 
 
580 aa  574  1.0000000000000001e-162  Dechloromonas aromatica RCB  Bacteria  normal  0.814023  normal 
 
 
-
 
NC_007947  Mfla_0148  phosphoenolpyruvate--protein phosphotransferase  51.88 
 
 
579 aa  570  1e-161  Methylobacillus flagellatus KT  Bacteria  normal  normal  0.198585 
 
 
-
 
NC_007404  Tbd_2414  phosphoenolpyruvate--protein phosphotransferase  52.65 
 
 
574 aa  549  1e-155  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.0115007  normal 
 
 
-
 
NC_007484  Noc_2800  phosphoenolpyruvate-protein phosphotransferase  46.4 
 
 
582 aa  519  1e-146  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_2625  phosphoenolpyruvate-protein phosphotransferase  45.85 
 
 
570 aa  452  1e-125  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.0132531  normal 
 
 
-
 
NC_011761  AFE_3018  phosphoenolpyruvate-protein phosphotransferase  45.85 
 
 
570 aa  452  1e-125  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2965  phosphoenolpyruvate-protein phosphotransferase  44.6 
 
 
588 aa  436  1e-121  Geobacter uraniireducens Rf4  Bacteria  normal  0.399431  n/a   
 
 
-
 
NC_010717  PXO_02219  phosphoenolpyruvate-protein phosphotransferase  45.11 
 
 
576 aa  432  1e-120  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.696729  n/a   
 
 
-
 
NC_009943  Dole_2698  phosphoenolpyruvate-protein phosphotransferase  41.96 
 
 
591 aa  426  1e-118  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1929  PEP-protein phosphotransferase system enzyme I  43.65 
 
 
591 aa  421  1e-116  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.000000000196208  n/a   
 
 
-
 
NC_008609  Ppro_0981  phosphoenolpyruvate-protein phosphotransferase  43.39 
 
 
588 aa  419  1e-116  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_3875  phosphoenolpyruvate-protein phosphotransferase  40.55 
 
 
568 aa  416  9.999999999999999e-116  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3384  phosphoenolpyruvate-protein phosphotransferase  43.53 
 
 
586 aa  417  9.999999999999999e-116  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_010320  Teth514_0827  phosphoenolpyruvate-protein phosphotransferase  38.69 
 
 
573 aa  414  1e-114  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013515  Smon_0845  phosphoenolpyruvate-protein phosphotransferase  38.58 
 
 
569 aa  413  1e-114  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_012793  GWCH70_0914  phosphoenolpyruvate-protein phosphotransferase  39.52 
 
 
573 aa  412  1e-114  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1289  phosphoenolpyruvate--protein phosphotransferase  43.09 
 
 
588 aa  412  1e-113  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000000244678  hitchhiker  0.0000151744 
 
 
-
 
NC_013440  Hoch_2761  phosphoenolpyruvate-protein phosphotransferase  41.28 
 
 
592 aa  412  1e-113  Haliangium ochraceum DSM 14365  Bacteria  normal  0.754938  normal  0.0822836 
 
 
-
 
NC_013411  GYMC61_1787  phosphoenolpyruvate-protein phosphotransferase  39.52 
 
 
573 aa  403  1e-111  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_002976  SERP0670  phosphoenolpyruvate-protein phosphotransferase  37.61 
 
 
572 aa  398  1e-109  Staphylococcus epidermidis RP62A  Bacteria  normal  0.98419  n/a   
 
 
-
 
NC_010577  XfasM23_0664  phosphoenolpyruvate-protein phosphotransferase  40.49 
 
 
590 aa  397  1e-109  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_0225  phosphoenolpyruvate-protein phosphotransferase  41.49 
 
 
571 aa  395  1e-109  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_0151  phosphoenolpyruvate-protein phosphotransferase  38.72 
 
 
550 aa  398  1e-109  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0772  phosphoenolpyruvate-protein phosphotransferase  40.2 
 
 
614 aa  397  1e-109  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.0814211  normal 
 
 
-
 
NC_012880  Dd703_3192  phosphoenolpyruvate-protein phosphotransferase  39.72 
 
 
575 aa  396  1e-109  Dickeya dadantii Ech703  Bacteria  normal  0.120392  n/a   
 
 
-
 
NC_009487  SaurJH9_1144  phosphoenolpyruvate-protein phosphotransferase  37.89 
 
 
572 aa  394  1e-108  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_0153  phosphoenolpyruvate--protein phosphotransferase  41.75 
 
 
599 aa  392  1e-108  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.786047  n/a   
 
 
-
 
NC_009632  SaurJH1_1166  phosphoenolpyruvate-protein phosphotransferase  37.89 
 
 
572 aa  394  1e-108  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_008532  STER_1242  phosphoenolpyruvate-protein kinase  39.66 
 
 
577 aa  393  1e-108  Streptococcus thermophilus LMD-9  Bacteria  normal  n/a   
 
 
-
 
NC_010513  Xfasm12_0750  phosphotransferase system enzyme I  40 
 
 
590 aa  395  1e-108  Xylella fastidiosa M12  Bacteria  normal  0.8184  n/a   
 
 
-
 
NC_011891  A2cp1_0171  phosphoenolpyruvate-protein phosphotransferase  41.72 
 
 
598 aa  389  1e-107  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007633  MCAP_0233  phosphoenolpyruvate-protein phosphotransferase  37.37 
 
 
573 aa  390  1e-107  Mycoplasma capricolum subsp. capricolum ATCC 27343  Bacteria  normal  0.196858  n/a   
 
 
-
 
NC_011145  AnaeK_0160  phosphoenolpyruvate-protein phosphotransferase  42.24 
 
 
598 aa  392  1e-107  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_0774  phosphoenolpyruvate-protein phosphotransferase  40.49 
 
 
575 aa  389  1e-107  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  unclonable  0.000161512  n/a   
 
 
-
 
NC_009675  Anae109_0158  phosphoenolpyruvate-protein phosphotransferase  41.24 
 
 
599 aa  387  1e-106  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.771311  normal  0.152518 
 
 
-
 
NC_010465  YPK_1427  phosphoenolpyruvate-protein phosphotransferase  39.36 
 
 
575 aa  388  1e-106  Yersinia pseudotuberculosis YPIII  Bacteria  hitchhiker  0.0000892  n/a   
 
 
-
 
NC_009708  YpsIP31758_1316  phosphoenolpyruvate-protein phosphotransferase  39.36 
 
 
575 aa  388  1e-106  Yersinia pseudotuberculosis IP 31758  Bacteria  unclonable  0.00000000000000159263  n/a   
 
 
-
 
NC_010571  Oter_2443  phosphoenolpyruvate-protein phosphotransferase  39.49 
 
 
587 aa  385  1e-106  Opitutus terrae PB90-1  Bacteria  normal  0.154054  normal  0.955997 
 
 
-
 
NC_010159  YpAngola_A2749  phosphoenolpyruvate-protein phosphotransferase  39.36 
 
 
575 aa  388  1e-106  Yersinia pestis Angola  Bacteria  hitchhiker  0.0000000117022  normal 
 
 
-
 
NC_008527  LACR_0104  phosphoenolpyruvate-protein phosphotransferase  39.39 
 
 
575 aa  385  1e-106  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.106099  n/a   
 
 
-
 
NC_013223  Dret_2015  phosphoenolpyruvate-protein phosphotransferase  38.34 
 
 
599 aa  386  1e-106  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.475884 
 
 
-
 
NC_002939  GSU1881  phosphoenolpyruvate-protein phosphotransferase  41.49 
 
 
588 aa  382  1e-105  Geobacter sulfurreducens PCA  Bacteria  normal  0.0884031  n/a   
 
 
-
 
NC_008530  LGAS_1360  phosphoenolpyruvate-protein kinase  38.29 
 
 
579 aa  382  1e-105  Lactobacillus gasseri ATCC 33323  Bacteria  normal  0.432867  hitchhiker  0.000142062 
 
 
-
 
CP001509  ECD_02316  PEP-protein phosphotransferase of PTS system (enzyme I)  38.86 
 
 
575 aa  382  1e-104  Escherichia coli BL21(DE3)  Bacteria  unclonable  0.00000589054  n/a   
 
 
-
 
NC_009436  Ent638_2944  phosphoenolpyruvate-protein phosphotransferase  38.69 
 
 
575 aa  379  1e-104  Enterobacter sp. 638  Bacteria  hitchhiker  0.000558026  normal  0.274813 
 
 
-
 
CP001637  EcDH1_1245  phosphoenolpyruvate-protein phosphotransferase  38.86 
 
 
575 aa  381  1e-104  Escherichia coli DH1  Bacteria  hitchhiker  0.0000000000730573  n/a   
 
 
-
 
NC_010483  TRQ2_0637  phosphoenolpyruvate-protein phosphotransferase  36.78 
 
 
550 aa  379  1e-104  Thermotoga sp. RQ2  Bacteria  normal  0.612876  n/a   
 
 
-
 
NC_009800  EcHS_A2551  phosphoenolpyruvate-protein phosphotransferase  38.86 
 
 
575 aa  382  1e-104  Escherichia coli HS  Bacteria  hitchhiker  0.0000126439  n/a   
 
 
-
 
NC_010498  EcSMS35_2571  phosphoenolpyruvate-protein phosphotransferase  38.86 
 
 
575 aa  382  1e-104  Escherichia coli SMS-3-5  Bacteria  hitchhiker  0.00718349  normal 
 
 
-
 
NC_012912  Dd1591_3270  phosphoenolpyruvate-protein phosphotransferase  38.68 
 
 
575 aa  380  1e-104  Dickeya zeae Ech1591  Bacteria  normal  0.0139639  n/a   
 
 
-
 
NC_010468  EcolC_1262  phosphoenolpyruvate-protein phosphotransferase  38.86 
 
 
575 aa  382  1e-104  Escherichia coli ATCC 8739  Bacteria  hitchhiker  0.0000565297  decreased coverage  0.00000416053 
 
 
-
 
NC_011353  ECH74115_3647  phosphoenolpyruvate-protein phosphotransferase  38.86 
 
 
575 aa  382  1e-104  Escherichia coli O157:H7 str. EC4115  Bacteria  hitchhiker  0.000415722  normal 
 
 
-
 
NC_012892  B21_02277  hypothetical protein  38.86 
 
 
575 aa  382  1e-104  Escherichia coli BL21  Bacteria  unclonable  0.00000407326  n/a   
 
 
-
 
NC_009674  Bcer98_2747  phosphoenolpyruvate-protein phosphotransferase  38.65 
 
 
570 aa  381  1e-104  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.210737  n/a   
 
 
-
 
NC_009801  EcE24377A_2703  phosphoenolpyruvate-protein phosphotransferase  38.86 
 
 
575 aa  382  1e-104  Escherichia coli E24377A  Bacteria  hitchhiker  0.000279756  n/a   
 
 
-
 
NC_011094  SeSA_A2668  phosphoenolpyruvate-protein phosphotransferase  38.34 
 
 
575 aa  377  1e-103  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.146845  normal 
 
 
-
 
NC_004116  SAG0822  phosphoenolpyruvate-protein phosphotransferase  38.62 
 
 
577 aa  375  1e-103  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.5664  n/a   
 
 
-
 
NC_006274  BCZK3804  phosphoenolpyruvate-protein phosphotransferase  39.12 
 
 
570 aa  377  1e-103  Bacillus cereus E33L  Bacteria  normal  0.0211135  n/a   
 
 
-
 
NC_011773  BCAH820_4068  phosphoenolpyruvate-protein phosphotransferase  38.65 
 
 
570 aa  376  1e-103  Bacillus cereus AH820  Bacteria  n/a    normal  0.767709 
 
 
-
 
NC_007643  Rru_A3445  phosphoenolpyruvate--protein phosphotransferase  41.49 
 
 
607 aa  377  1e-103  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A2626  phosphoenolpyruvate-protein phosphotransferase  38.34 
 
 
575 aa  377  1e-103  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.0959773  normal 
 
 
-
 
NC_011071  Smal_0947  phosphoenolpyruvate-protein phosphotransferase  43.09 
 
 
589 aa  377  1e-103  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.0344256  normal  0.526439 
 
 
-
 
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