Gene Rpic_0204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0204 
Symbol 
ID6287934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp221835 
End bp223586 
Gene Length1752 bp 
Protein Length583 aa 
Translation table11 
GC content64% 
IMG OID642623775 
Productphosphoenolpyruvate-protein phosphotransferase 
Protein accessionYP_001897799 
Protein GI187927312 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1080] Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) 
TIGRFAM ID[TIGR01417] phosphoenolpyruvate-protein phosphotransferase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.214502 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTTTA CCCTTCACGG TATTCCGGTC TCGCGCGGCA TCTCCATCGG CCGCGCCCAC 
ATGCTGGCGC GCGCGGCGCT CGATGTGTCG CACTACCTGG TCGACGAAGA CAAGCTTGAC
GCTGAGGTCG AGCGCTTGCG CAGTGCCCGC GCCACCGTAC GCTCCGAACT GGCCGCACTC
AAGCGCGACC TCCCGAGCGA TGTGCCCGAA GAGATGGGTG CCTTCCTCGA TGTGCACGCG
ATGATTTTGG ATGACGCGTT GCTCTCGCAG GTACCCGAGA CGCTGATTCG CCAGCGGCGC
TACAACGCAG AGTGGGCGCT CACAACGCAG CTTGAAGAGC TTATCCGCCA GTTCGGTGAA
ATCGAAGACG AATACCTGCG CGAGCGCAAG GCCGACATCG AGCAGGTGGT TGAACGCATT
CTGAAGGTAC TGGCCGGCGC GCCGGCCTTG GCGCCGGCAC CGGTGGCCGT TGGCTGCGAT
CCGGATGCCG GCATGATCGT CGTCGCACAC GATATTGCGC CGGCCGACAT GCTGCAGTTC
CGCGGCCAGA CCTTCGCCGG CTTCGTGACC GACCTGGGCG GCCGCACCTC GCACACCGCC
ATCGTGGCGC GTAGCCTCGA CATTCCGGCG GCGGTAGGTG TGCATAACGC GAGTACGCTG
ATTCGGCAGG ATGACATCGT CGTCATTGAC GGCGACAACG GCATCGTCAT TGTCGATCCG
AGCACGTCCA TCCTTGAGGA ATACCGCCAC CGCCGCAGCG AAGGCGAGCT GCAGAAGAAG
CGTCTCGAAC GTCTGCGTCA TACGCCTACC GTTACACTCG ACGGTACGCA AATCGAACTG
CAGGCGAACA TCGAAATGCC CGAAGATGCG GCTGCCGCTG TCAAAGCCGG CGCCGTGGGC
GTGGGCCTGT TCCGCTCCGA ATTCCTCTTC ATGAACCGTC GTGGCGCGCT ACCTGACGAG
GAAGAACAGT TCCGCGCGTA CCGTACCGCC GTTGAATCGA TGATGGGCCT GCCCGTCACC
ATCCGCACCA TCGACATCGG TGCCGACAAG CCGCTGGACA TCCGCGACGA CGTGTTCGAG
ACCGCGCCCA ATCCGGCGCT GGGTTTGCGG GCGATCCGCT GGTCGCTGTC AGAGCCGGCG
ATGTTCCTGA CGCAGTTGCG CGCGCTGCTG CGGGCGTCGG CATTTGGGCC GATCAAGATT
CTCGTGCCGA TGTTGGCGCA CGCCCGCGAA ATCGACCAGA CCCTGGAATT GCTGGCGCGC
GCCAAGGCTT CGCTCGACGC CGACGGCCTG GCCTATGATC CGGGCATCAA GGTCGGTGCC
ATGATCGAGA TACCGGCCGC CGTGCTGATC CTGCCAGTGT TCCTGCGCCG CATGGATTTT
CTCTCGATCG GCACGAACGA CCTGATCCAG TACACGCTCG CCATCGATCG CGCCGACAAC
GCCGTCGCGC ATCTGTACGA CCCGCTGCAT CCAGCGGTGC TGCAATTGAT CGCGCGCACC
ATCCGCGAAG CGCATCAGGC GGGCAAGCCC GTTTCCGTGT GCGGCGAGAT GGCGGGCGAC
GCTTCCATGA CGCGCCTGCT GCTCGGCATG GGCCTCACCG AATTCTCGAT GCATCCGTCG
CAGTTGCTGA GTGTCAAGCA GCAGATCCTG CGCTCGGACC GCCCGCGCTT GATGCGCGAG
GCCGACCGCC TGCTGCACGC CTGCGAGCCG GCCGAAATCG AAGAGGCGCT CGGCGCGCTG
GCGCGGGCTT GA
 
Protein sequence
MPFTLHGIPV SRGISIGRAH MLARAALDVS HYLVDEDKLD AEVERLRSAR ATVRSELAAL 
KRDLPSDVPE EMGAFLDVHA MILDDALLSQ VPETLIRQRR YNAEWALTTQ LEELIRQFGE
IEDEYLRERK ADIEQVVERI LKVLAGAPAL APAPVAVGCD PDAGMIVVAH DIAPADMLQF
RGQTFAGFVT DLGGRTSHTA IVARSLDIPA AVGVHNASTL IRQDDIVVID GDNGIVIVDP
STSILEEYRH RRSEGELQKK RLERLRHTPT VTLDGTQIEL QANIEMPEDA AAAVKAGAVG
VGLFRSEFLF MNRRGALPDE EEQFRAYRTA VESMMGLPVT IRTIDIGADK PLDIRDDVFE
TAPNPALGLR AIRWSLSEPA MFLTQLRALL RASAFGPIKI LVPMLAHARE IDQTLELLAR
AKASLDADGL AYDPGIKVGA MIEIPAAVLI LPVFLRRMDF LSIGTNDLIQ YTLAIDRADN
AVAHLYDPLH PAVLQLIART IREAHQAGKP VSVCGEMAGD ASMTRLLLGM GLTEFSMHPS
QLLSVKQQIL RSDRPRLMRE ADRLLHACEP AEIEEALGAL ARA