More than 300 homologs were found in PanDaTox collection
for query gene Vapar_4896 on replicon NC_012791
Organism: Variovorax paradoxus S110



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008785  BMASAVP1_A0185  phosphoenolpyruvate-protein phosphotransferase  58.19 
 
 
596 aa  653    Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2834  phosphoenolpyruvate-protein phosphotransferase  58.19 
 
 
596 aa  653    Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0292  phosphoenolpyruvate-protein phosphotransferase  76.01 
 
 
589 aa  839    Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_0409  phosphoenolpyruvate-protein phosphotransferase  73.29 
 
 
591 aa  821    Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc0348  phosphoenolpyruvate-protein phosphotransferase transmembrane  59.2 
 
 
586 aa  664    Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.0117404 
 
 
-
 
NC_008836  BMA10229_A1407  phosphoenolpyruvate-protein phosphotransferase  58.19 
 
 
596 aa  653    Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_1033  phosphoenolpyruvate-protein phosphotransferase  63.65 
 
 
603 aa  746    Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_006348  BMA3211  phosphoenolpyruvate-protein phosphotransferase  58.36 
 
 
590 aa  655    Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A0297  phosphoenolpyruvate--protein phosphotransferase  60.3 
 
 
586 aa  688    Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0658  phosphoenolpyruvate-protein phosphotransferase  58.36 
 
 
590 aa  655    Burkholderia pseudomallei 1710b  Bacteria  normal  0.536358  n/a   
 
 
-
 
NC_010681  Bphyt_0531  phosphoenolpyruvate-protein phosphotransferase  57.05 
 
 
582 aa  663    Burkholderia phytofirmans PsJN  Bacteria  normal  0.560234  normal 
 
 
-
 
NC_007510  Bcep18194_A6189  phosphoenolpyruvate--protein phosphotransferase  57.69 
 
 
592 aa  673    Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I0413  phosphoenolpyruvate-protein phosphotransferase  58.03 
 
 
590 aa  656    Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0603  phosphoenolpyruvate-protein phosphotransferase  74.96 
 
 
591 aa  909    Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_0239  phosphoenolpyruvate-protein phosphotransferase  73.62 
 
 
591 aa  852    Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.390197  normal  0.455479 
 
 
-
 
NC_007948  Bpro_0299  phosphoenolpyruvate--protein phosphotransferase  76.09 
 
 
600 aa  889    Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A4184  phosphoenolpyruvate--protein phosphotransferase  57.05 
 
 
601 aa  651    Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_0354  phosphoenolpyruvate--protein phosphotransferase  76.67 
 
 
592 aa  869    Acidovorax citrulli AAC00-1  Bacteria  normal  hitchhiker  0.00159847 
 
 
-
 
NC_010084  Bmul_0443  phosphoenolpyruvate-protein phosphotransferase  57.19 
 
 
627 aa  655    Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_0246  phosphoenolpyruvate--protein phosphotransferase  61.37 
 
 
585 aa  706    Cupriavidus metallidurans CH34  Bacteria  normal  0.331239  normal 
 
 
-
 
NC_008060  Bcen_2246  phosphoenolpyruvate-protein phosphotransferase  57.53 
 
 
632 aa  655    Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_0204  phosphoenolpyruvate-protein phosphotransferase  58.66 
 
 
583 aa  650    Ralstonia pickettii 12J  Bacteria  normal  normal  0.214502 
 
 
-
 
NC_008786  Veis_1282  phosphoenolpyruvate-protein phosphotransferase  75.21 
 
 
592 aa  861    Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.889081  normal 
 
 
-
 
NC_010508  Bcenmc03_2871  phosphoenolpyruvate-protein phosphotransferase  57.53 
 
 
592 aa  655    Burkholderia cenocepacia MC0-3  Bacteria  normal  0.654015  normal  0.294713 
 
 
-
 
NC_009074  BURPS668_0474  phosphoenolpyruvate-protein phosphotransferase  58.19 
 
 
596 aa  653    Burkholderia pseudomallei 668  Bacteria  normal  0.368483  n/a   
 
 
-
 
NC_010551  BamMC406_2777  phosphoenolpyruvate-protein phosphotransferase  57.36 
 
 
591 aa  672    Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_008390  Bamb_2915  phosphoenolpyruvate-protein phosphotransferase  57.19 
 
 
593 aa  669    Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0326  phosphoenolpyruvate--protein phosphotransferase  63.64 
 
 
611 aa  718    Methylibium petroleiphilum PM1  Bacteria  hitchhiker  0.00077396  normal  0.0251738 
 
 
-
 
NC_008542  Bcen2424_2860  phosphoenolpyruvate-protein phosphotransferase  57.53 
 
 
592 aa  655    Burkholderia cenocepacia HI2424  Bacteria  normal  0.814434  n/a   
 
 
-
 
NC_008782  Ajs_0297  phosphoenolpyruvate--protein phosphotransferase  76.17 
 
 
589 aa  841    Acidovorax sp. JS42  Bacteria  normal  hitchhiker  0.000342223 
 
 
-
 
NC_012791  Vapar_4896  phosphoenolpyruvate-protein phosphotransferase  100 
 
 
598 aa  1203    Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_0223  phosphoenolpyruvate-protein phosphotransferase  58.49 
 
 
583 aa  647    Ralstonia pickettii 12D  Bacteria  normal  hitchhiker  0.000337808 
 
 
-
 
NC_010622  Bphy_0262  phosphoenolpyruvate-protein phosphotransferase  56.69 
 
 
580 aa  657    Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009076  BURPS1106A_0493  phosphoenolpyruvate-protein phosphotransferase  58.19 
 
 
596 aa  653    Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007614  Nmul_A0220  phosphoenolpyruvate-protein phosphotransferase  51.93 
 
 
575 aa  575  1.0000000000000001e-163  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_009379  Pnuc_1951  phosphoenolpyruvate-protein phosphotransferase  52.2 
 
 
583 aa  567  1e-160  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_0467  phosphoenolpyruvate-protein phosphotransferase  50.08 
 
 
576 aa  559  1e-158  Thauera sp. MZ1T  Bacteria  normal  0.688262  n/a   
 
 
-
 
NC_010531  Pnec_1656  phosphoenolpyruvate-protein phosphotransferase  51.18 
 
 
583 aa  557  1e-157  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal  0.619102 
 
 
-
 
NC_007298  Daro_4084  phosphoenolpyruvate--protein phosphotransferase  50.42 
 
 
580 aa  537  1e-151  Dechloromonas aromatica RCB  Bacteria  normal  0.814023  normal 
 
 
-
 
NC_007947  Mfla_0148  phosphoenolpyruvate--protein phosphotransferase  48.22 
 
 
579 aa  500  1e-140  Methylobacillus flagellatus KT  Bacteria  normal  normal  0.198585 
 
 
-
 
NC_007404  Tbd_2414  phosphoenolpyruvate--protein phosphotransferase  48.74 
 
 
574 aa  488  1e-136  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.0115007  normal 
 
 
-
 
NC_007484  Noc_2800  phosphoenolpyruvate-protein phosphotransferase  43.53 
 
 
582 aa  468  9.999999999999999e-131  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_0827  phosphoenolpyruvate-protein phosphotransferase  41.06 
 
 
573 aa  414  1e-114  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_011761  AFE_3018  phosphoenolpyruvate-protein phosphotransferase  42.19 
 
 
570 aa  405  1e-111  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_2625  phosphoenolpyruvate-protein phosphotransferase  42.19 
 
 
570 aa  405  1e-111  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.0132531  normal 
 
 
-
 
NC_009674  Bcer98_2747  phosphoenolpyruvate-protein phosphotransferase  38.71 
 
 
570 aa  399  9.999999999999999e-111  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.210737  n/a   
 
 
-
 
NC_012793  GWCH70_0914  phosphoenolpyruvate-protein phosphotransferase  38.6 
 
 
573 aa  400  9.999999999999999e-111  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1787  phosphoenolpyruvate-protein phosphotransferase  40.21 
 
 
573 aa  397  1e-109  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009943  Dole_2698  phosphoenolpyruvate-protein phosphotransferase  37.33 
 
 
591 aa  394  1e-108  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK3804  phosphoenolpyruvate-protein phosphotransferase  38.37 
 
 
570 aa  392  1e-108  Bacillus cereus E33L  Bacteria  normal  0.0211135  n/a   
 
 
-
 
NC_010717  PXO_02219  phosphoenolpyruvate-protein phosphotransferase  40.53 
 
 
576 aa  394  1e-108  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.696729  n/a   
 
 
-
 
NC_008532  STER_1242  phosphoenolpyruvate-protein kinase  38.58 
 
 
577 aa  395  1e-108  Streptococcus thermophilus LMD-9  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_3789  phosphoenolpyruvate-protein phosphotransferase  38.2 
 
 
570 aa  391  1e-107  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.411643  n/a   
 
 
-
 
NC_011773  BCAH820_4068  phosphoenolpyruvate-protein phosphotransferase  38.2 
 
 
570 aa  390  1e-107  Bacillus cereus AH820  Bacteria  n/a    normal  0.767709 
 
 
-
 
NC_011725  BCB4264_A4157  phosphoenolpyruvate-protein phosphotransferase  38.2 
 
 
570 aa  391  1e-107  Bacillus cereus B4264  Bacteria  hitchhiker  0.00784189  n/a   
 
 
-
 
NC_011658  BCAH187_A4179  phosphoenolpyruvate-protein phosphotransferase  38.2 
 
 
570 aa  391  1e-107  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000276163  n/a   
 
 
-
 
NC_011772  BCG9842_B1081  phosphoenolpyruvate-protein phosphotransferase  38.2 
 
 
570 aa  390  1e-107  Bacillus cereus G9842  Bacteria  normal  0.696221  normal 
 
 
-
 
NC_012034  Athe_0151  phosphoenolpyruvate-protein phosphotransferase  37.41 
 
 
550 aa  389  1e-106  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_0158  phosphoenolpyruvate-protein phosphotransferase  40.99 
 
 
599 aa  385  1e-106  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.771311  normal  0.152518 
 
 
-
 
NC_009487  SaurJH9_1144  phosphoenolpyruvate-protein phosphotransferase  37.99 
 
 
572 aa  388  1e-106  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1929  PEP-protein phosphotransferase system enzyme I  40.85 
 
 
591 aa  387  1e-106  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.000000000196208  n/a   
 
 
-
 
NC_010184  BcerKBAB4_3877  phosphoenolpyruvate-protein phosphotransferase  38.2 
 
 
570 aa  386  1e-106  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.584229  n/a   
 
 
-
 
NC_009632  SaurJH1_1166  phosphoenolpyruvate-protein phosphotransferase  37.99 
 
 
572 aa  388  1e-106  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP0670  phosphoenolpyruvate-protein phosphotransferase  38.09 
 
 
572 aa  385  1e-105  Staphylococcus epidermidis RP62A  Bacteria  normal  0.98419  n/a   
 
 
-
 
NC_003909  BCE_4115  phosphoenolpyruvate-protein phosphotransferase  38.03 
 
 
568 aa  383  1e-105  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS3958  phosphoenolpyruvate-protein phosphotransferase  37.69 
 
 
570 aa  383  1e-105  Bacillus anthracis str. Sterne  Bacteria  normal  0.112067  n/a   
 
 
-
 
NC_012918  GM21_3384  phosphoenolpyruvate-protein phosphotransferase  40.07 
 
 
586 aa  385  1e-105  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007517  Gmet_1289  phosphoenolpyruvate--protein phosphotransferase  40.67 
 
 
588 aa  384  1e-105  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000000244678  hitchhiker  0.0000151744 
 
 
-
 
NC_007530  GBAA_4267  phosphoenolpyruvate-protein phosphotransferase  37.69 
 
 
570 aa  383  1e-105  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0914385  n/a   
 
 
-
 
NC_009483  Gura_2965  phosphoenolpyruvate-protein phosphotransferase  39.9 
 
 
588 aa  383  1e-105  Geobacter uraniireducens Rf4  Bacteria  normal  0.399431  n/a   
 
 
-
 
NC_008531  LEUM_1779  phosphoenolpyruvate--protein phosphotransferase  39.15 
 
 
571 aa  382  1e-105  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_2443  phosphoenolpyruvate-protein phosphotransferase  38.42 
 
 
587 aa  384  1e-105  Opitutus terrae PB90-1  Bacteria  normal  0.154054  normal  0.955997 
 
 
-
 
NC_008010  Dgeo_2622  phosphoenolpyruvate-protein phosphotransferase  44.19 
 
 
584 aa  380  1e-104  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_3875  phosphoenolpyruvate-protein phosphotransferase  38.85 
 
 
568 aa  380  1e-104  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_0225  phosphoenolpyruvate-protein phosphotransferase  39.27 
 
 
571 aa  379  1e-104  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_0171  phosphoenolpyruvate-protein phosphotransferase  40.28 
 
 
598 aa  377  1e-103  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_0160  phosphoenolpyruvate-protein phosphotransferase  40.1 
 
 
598 aa  375  1e-103  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_004116  SAG0822  phosphoenolpyruvate-protein phosphotransferase  37.23 
 
 
577 aa  374  1e-102  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.5664  n/a   
 
 
-
 
NC_009708  YpsIP31758_1316  phosphoenolpyruvate-protein phosphotransferase  38.98 
 
 
575 aa  374  1e-102  Yersinia pseudotuberculosis IP 31758  Bacteria  unclonable  0.00000000000000159263  n/a   
 
 
-
 
NC_012880  Dd703_3192  phosphoenolpyruvate-protein phosphotransferase  38.64 
 
 
575 aa  372  1e-102  Dickeya dadantii Ech703  Bacteria  normal  0.120392  n/a   
 
 
-
 
NC_007760  Adeh_0153  phosphoenolpyruvate--protein phosphotransferase  40.28 
 
 
599 aa  374  1e-102  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.786047  n/a   
 
 
-
 
NC_010644  Emin_0131  phosphoenolpyruvate-protein phosphotransferase  36.06 
 
 
580 aa  375  1e-102  Elusimicrobium minutum Pei191  Bacteria  normal  normal  0.100056 
 
 
-
 
NC_010465  YPK_1427  phosphoenolpyruvate-protein phosphotransferase  38.98 
 
 
575 aa  374  1e-102  Yersinia pseudotuberculosis YPIII  Bacteria  hitchhiker  0.0000892  n/a   
 
 
-
 
NC_010159  YpAngola_A2749  phosphoenolpyruvate-protein phosphotransferase  38.98 
 
 
575 aa  374  1e-102  Yersinia pestis Angola  Bacteria  hitchhiker  0.0000000117022  normal 
 
 
-
 
NC_002939  GSU1881  phosphoenolpyruvate-protein phosphotransferase  39.9 
 
 
588 aa  370  1e-101  Geobacter sulfurreducens PCA  Bacteria  normal  0.0884031  n/a   
 
 
-
 
NC_006055  Mfl519  phosphoenolpyruvate-protein phosphotransferase  35.51 
 
 
573 aa  370  1e-101  Mesoplasma florum L1  Bacteria  normal  n/a   
 
 
-
 
NC_008527  LACR_0104  phosphoenolpyruvate-protein phosphotransferase  37.71 
 
 
575 aa  371  1e-101  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.106099  n/a   
 
 
-
 
NC_013440  Hoch_2761  phosphoenolpyruvate-protein phosphotransferase  38.14 
 
 
592 aa  370  1e-101  Haliangium ochraceum DSM 14365  Bacteria  normal  0.754938  normal  0.0822836 
 
 
-
 
NC_010001  Cphy_1770  phosphoenolpyruvate-protein phosphotransferase  36.49 
 
 
544 aa  366  1e-100  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_0774  phosphoenolpyruvate-protein phosphotransferase  38.49 
 
 
575 aa  366  1e-100  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  unclonable  0.000161512  n/a   
 
 
-
 
NC_012912  Dd1591_3270  phosphoenolpyruvate-protein phosphotransferase  38.29 
 
 
575 aa  365  1e-100  Dickeya zeae Ech1591  Bacteria  normal  0.0139639  n/a   
 
 
-
 
NC_010577  XfasM23_0664  phosphoenolpyruvate-protein phosphotransferase  37.19 
 
 
590 aa  365  1e-100  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_010513  Xfasm12_0750  phosphotransferase system enzyme I  37.35 
 
 
590 aa  367  1e-100  Xylella fastidiosa M12  Bacteria  normal  0.8184  n/a   
 
 
-
 
NC_013515  Smon_0845  phosphoenolpyruvate-protein phosphotransferase  35.81 
 
 
569 aa  368  1e-100  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_008528  OEOE_0647  phosphoenolpyruvate--protein phosphotransferase  36.41 
 
 
575 aa  365  1e-100  Oenococcus oeni PSU-1  Bacteria  normal  0.0814297  n/a   
 
 
-
 
NC_008609  Ppro_0981  phosphoenolpyruvate-protein phosphotransferase  38.14 
 
 
588 aa  367  1e-100  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_1089  phosphoenolpyruvate--protein phosphotransferase  37.18 
 
 
592 aa  365  1e-99  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_007633  MCAP_0233  phosphoenolpyruvate-protein phosphotransferase  35.07 
 
 
573 aa  363  5.0000000000000005e-99  Mycoplasma capricolum subsp. capricolum ATCC 27343  Bacteria  normal  0.196858  n/a   
 
 
-
 
NC_013171  Apre_0883  phosphoenolpyruvate-protein phosphotransferase  33.56 
 
 
567 aa  362  8e-99  Anaerococcus prevotii DSM 20548  Bacteria  hitchhiker  0.000204387  n/a   
 
 
-
 
NC_008751  Dvul_2152  phosphoenolpyruvate-protein phosphotransferase  36.55 
 
 
590 aa  359  6e-98  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>