Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_1656 |
Symbol | |
ID | 6183367 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | - |
Start bp | 1452676 |
End bp | 1454427 |
Gene Length | 1752 bp |
Protein Length | 583 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641672173 |
Product | phosphoenolpyruvate-protein phosphotransferase |
Protein accession | YP_001798343 |
Protein GI | 171464230 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1080] Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) |
TIGRFAM ID | [TIGR01417] phosphoenolpyruvate-protein phosphotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 0.619102 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATTTG CTTTGCACGG AATACCGGTA TCGAAAGGCA TTGCTATTGG CAAGGCGGTA CTGATTTCGC GCGCAGCGTT AGAGGTAAGT CACTATTTAG TTGAGGCTGG CAAAGAAGAG GCCGAGGCTC AAAAGTTATT AGATGCATTT GATCAAGTGC GCTTAGAGCT TGAGCAGTTA CGTCAAGGCT TGCCAAAAGA TGCGCCACAA GAGATGGCTG CATTCTTAGA TGTGCACGGC ATGATATTGG CCGATCCCGC TTTGGCAGAA AAGCCAATTA AGCTAATTCG CACGCAAAGA TTAAATGCGG CTTGGGCGTT AACGACTGAG CTCAACGATC TTTTGGAGCA ATTTGCAGAT ATTGAAGATG CGTACTTAAA AGAGCGCGCA AACGATATTC GACAGGTTGC TGAGCGGGTG ATTAAGGCGC TTAATGCTCA GAAAAAAGAC TCGTTAAATT ATACCGATTT CTTGCCCGCA AGCGATATTG GGGTTGAATC CATCATTGTT GCTCACGATA TCGCACCGCA CGACATGCTG CGCTTTAAGG AGCATGCCTT TACAGGCTTT GTAACTGATC TTGGCGGTAA GACCTCTCAT ACTGCGATCG TGGCTCGTAG CATGGAGATC CCTGCGGTAG TGGGTGTGCG CCATGCCAGC GAAATGATTC GCCATGGCGA CTGGTTGGTA TTGGATGGTG AGCGCGGTGT AGTGGTAGTG GCTCCTGATG AGCAACTCTT AGCCGAGTAT CGCAAGCTAC AAACTCAAGT TTTAAAGGAG GCCCGCAAGC TCCAGCAGTT AAAACATGCC AAAACTGAAA CAGTCGATCG GGTTGAGATT GAGCTGTTCG CTAATATTGA GTTACCAGAA GACGCCATTC AGGCAGCGAA GTTGGGTGCT GTAGGTGTTG GTTTGTTCCG CTCGGAATTT TTATTCATGG ACCGCAAACA AGCTTTGCCG GATGAAGAGC AGCAATACCA AGAATATCGG CGTGTAGTGG ATTTGATGCA TGGTTTGCCT GTCAACATTC GAACGATTGA CGTTGGTGCA GATAAGGCTT TAGGTGGTGG CGGTAATATT TCCCAGACGG GCACATCCCC ATTAGGTTTG CGGGCGATCC GCTGGTCTTT AACAGAACCT GAAATCTTTC TGACGCAGCT TAGAGCAATT TTGCGTGCAT CAACGCATGG GCAAGCGCGC ATTATGATTC CGATGTTGGC GCATGCTAAA GAAATCGATG AATCATTTAG ACTGATTGAA AAAGCAAAGC AGCAGTTGCA TCAGCGTGGG AAAGCATTTA ATCCCAATAT TCAAGTTGGT GCGATGATAG AAACTCCGGC TGCTGCTTTG GTGCTACCGT TATTCATTAA TCGGTTTGAT TTCCTTTCCA TTGGTACAAA CGATTTAATT CAGTACACCT TGGCGATTGA CCGCGCTGAT CATGCAGTCG CACATTTGTA TGATCCTTTG CATCCAGCTA TATTGAATTT GTTGGCAAAC ATCATTGAGC AAGCTAAGCG TGCCAATGTG CCTGTCGCTG TTTGCGGCGA GATGGCTGGT GATCCCACAT TAACAAAATT ATTGCTTGCT TTAGGTTTGA CGGATTTCTC AATGCACTTT AGCCAGCTAT TGTTGGTAAA ACGGGAGATT TTGAAGGCAA ACGTGGGTTT ATTAAGAGCT CGGGTACCTA GGGTCTTGAG GGCTTATGAG CCTGAAGAGC AGGCAAAAGC TTTAGAGCGC TTGCTGTCTT AA
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Protein sequence | MTFALHGIPV SKGIAIGKAV LISRAALEVS HYLVEAGKEE AEAQKLLDAF DQVRLELEQL RQGLPKDAPQ EMAAFLDVHG MILADPALAE KPIKLIRTQR LNAAWALTTE LNDLLEQFAD IEDAYLKERA NDIRQVAERV IKALNAQKKD SLNYTDFLPA SDIGVESIIV AHDIAPHDML RFKEHAFTGF VTDLGGKTSH TAIVARSMEI PAVVGVRHAS EMIRHGDWLV LDGERGVVVV APDEQLLAEY RKLQTQVLKE ARKLQQLKHA KTETVDRVEI ELFANIELPE DAIQAAKLGA VGVGLFRSEF LFMDRKQALP DEEQQYQEYR RVVDLMHGLP VNIRTIDVGA DKALGGGGNI SQTGTSPLGL RAIRWSLTEP EIFLTQLRAI LRASTHGQAR IMIPMLAHAK EIDESFRLIE KAKQQLHQRG KAFNPNIQVG AMIETPAAAL VLPLFINRFD FLSIGTNDLI QYTLAIDRAD HAVAHLYDPL HPAILNLLAN IIEQAKRANV PVAVCGEMAG DPTLTKLLLA LGLTDFSMHF SQLLLVKREI LKANVGLLRA RVPRVLRAYE PEEQAKALER LLS
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