| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0246 |
|---|
| Symbol | |
|---|
| ID | 4037032 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | + |
|---|
| Start bp | 262011 |
|---|
| End bp | 263768 |
|---|
| Gene Length | 1758 bp |
|---|
| Protein Length | 585 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637975619 |
|---|
| Product | phosphoenolpyruvate--protein phosphotransferase |
|---|
| Protein accession | YP_582401 |
|---|
| Protein GI | 94309191 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1080] Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) |
|---|
| TIGRFAM ID | [TIGR01417] phosphoenolpyruvate-protein phosphotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.331239 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCTTTG CCTTGCACGG CATTCCGGTT TCTCGTGGGG TCGCCATCGG GCGAGCCCAT
ATTCTTGCGC CGGCTGCGCT GGATGTGTCG CACTACCTGG TCGATGAAGA CCGGCTCGAA
GCCGAGGTGG AGCGATTGCG TTCGGCACGC GCCGCGGTGC GGGCCGAGCT GATCACGCTC
AAGCGTGACC TGCCGCGCGA CGCGCCGGAG GAAATGGGGG CATTTCTCGA TGTCCACGCG
ATGATCCTCG ACGACGAGGC CCTGTCGCGC GAACCCGAGA CGCTGATTCT CCAACGCCGC
TATAACGCCG AGTGGGCCCT GACCACGCGA CTCGAAGAAC TGATGCGTCA GTTCGACGAG
ATCGAGGACG AGTATCTGCG CGAGCGCAAG GCCGACATCG AGCAGGTGGT GGAGCGGATC
CTGAAGGTGC TGGCCGGAGC GCCCGTGCTG GCGCCGGCGC CCGTGCCGAC GCTCGCGCCG
GATGGCGAGG CCACGCCGGG GGTGATCGTG GTGGCCCACG ACATCGGCCC GGCCGACATG
CTCCAGTTCA AGCACACCGT GTTCCACGGT TTCGTGACGG ACCTGGGCGG CCGTACATCG
CACACGGCTA TCGTCGCGCG CAGTCTCGAC ATCCCCGCCG CGGTGGGCGT CAAGAACGCG
AGCGAACTGA TCCGTCAGGA CGACTGGATC ATCATCGATG GCGATGCCGG CCTGGTGATC
GTCGATCCGT CGGCCATCAT TCTCGAAGAG TATCGGCACC GCCAGAGCGA GCGCGCGCTC
GAGAAGAAGC GCCTGCAGCG GCTGCGCCAC ATGCCGGCGG TGACGCTGGA CGGGCTCGAG
ATCGAACTGC TGGCCAATAT CGAGATGGCG GAGGATGCCG GTGCGGCGCT GTCCGCCGGC
GCCGTCGGGG TGGGGCTGTT CCGGTCCGAA TTCCTGTTCA TGAACCGGCG CGACGAGCTG
CCGGATGAAG ACGAGCAATT TCACGCGTAT CGCAACGCCG TGGAAGCGAT GCACGGGCTG
CCGGTCACGA TTCGGACCAT CGACATCGGC GCCGACAAGC CGCTCGACGG CCGTGGCGAC
GACTTCGAGA CCGCGCTGAA CCCCGCACTG GGTTTGCGCG CGATCCGCTG GTCGTTGTCA
GAGCCGGGGA TGTTCCTGAC CCAGTTGCGG GCGTTGCTGC GCGCTTCCGC GTTCGGCCCG
GTCCGGATTC TGATCCCGAT GCTGGCTCAC GCCGGTGAGA TCGACCAGAC GCTGGACCTG
ATCGAGCAAG CCAAGCGCCA GCTCGACGAA CGCGGCCTGC CGTACGACCC GGGTATCAAG
GTCGGGGCGA TGATTGAGAT CCCGGCTGCC GTGCTGCTGC TGCCGCTGTT CCTCAAGCGC
ATGGACTTCC TGTCCATCGG CACCAATGAC CTGATCCAGT ACACGCTGGC GATCGACCGC
GCCGACAATG CCGTGGCGCA CCTCTACGAC CCGCTTCACC CGGCCGTGCT GCAGCTGATT
GCCCGGACGA TCCGCGAAGC CAACCATGCG GGCGTGCCCG TCGCCGTGTG TGGCGAGATG
GCGGGGGATC CGGCGATGAC CCGGCTGCTG CTGGGCATGG GACTACGCGA GTTCTCGATG
CACCCGGCGC AATTGCTGCG GGTGAAGCAG GAAGTCATCC ATGCGGACTG CGAGCGCCTG
AGCAAGGCGG TCGACCAGAT CCTGAACTGC TATGAACCGG ACGAGCTTAC GGCCGCGTTG
AAGCAACTGA CAGCGTGA
|
|---|
| Protein sequence | MPFALHGIPV SRGVAIGRAH ILAPAALDVS HYLVDEDRLE AEVERLRSAR AAVRAELITL
KRDLPRDAPE EMGAFLDVHA MILDDEALSR EPETLILQRR YNAEWALTTR LEELMRQFDE
IEDEYLRERK ADIEQVVERI LKVLAGAPVL APAPVPTLAP DGEATPGVIV VAHDIGPADM
LQFKHTVFHG FVTDLGGRTS HTAIVARSLD IPAAVGVKNA SELIRQDDWI IIDGDAGLVI
VDPSAIILEE YRHRQSERAL EKKRLQRLRH MPAVTLDGLE IELLANIEMA EDAGAALSAG
AVGVGLFRSE FLFMNRRDEL PDEDEQFHAY RNAVEAMHGL PVTIRTIDIG ADKPLDGRGD
DFETALNPAL GLRAIRWSLS EPGMFLTQLR ALLRASAFGP VRILIPMLAH AGEIDQTLDL
IEQAKRQLDE RGLPYDPGIK VGAMIEIPAA VLLLPLFLKR MDFLSIGTND LIQYTLAIDR
ADNAVAHLYD PLHPAVLQLI ARTIREANHA GVPVAVCGEM AGDPAMTRLL LGMGLREFSM
HPAQLLRVKQ EVIHADCERL SKAVDQILNC YEPDELTAAL KQLTA
|
|---|
| |