Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4896 |
Symbol | |
ID | 7971590 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 5211491 |
End bp | 5213287 |
Gene Length | 1797 bp |
Protein Length | 598 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644795491 |
Product | phosphoenolpyruvate-protein phosphotransferase |
Protein accession | YP_002946766 |
Protein GI | 239817856 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1080] Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) |
TIGRFAM ID | [TIGR01417] phosphoenolpyruvate-protein phosphotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCTTCG CAGTCCACGG CCTCCCCGTC GCCCGTGGCA TTGCCATTGG CCGCGCGGTG CTGGTGGTGT CCAGCCGCAT CGACGTGGCC CACTACTTCA TCAAGCCCGA GGAAGTGGAG ACCGAGATCG ACCGGGTGCG CATGGCCCGC AATGCGGTGG CCGACGAGCT TGCCAAGCTG CAGGCCAGCG TCGCGCTGAT GGGCCCCAAC GATGCGCCGC ACGAGCTCGC CGCGCTGCTC GAGGTGCACC AGATGCTGCT GCAGGACGAG GCGCTCACCG GCGGCGTCAA GCACTGGATC ACCGACCGGC TCTACAACGC CGAGTGGGCG CTGACCACGC AGCTCGAAAT CATCGCGCGC CAGTTCGACG AGATGGAGGA CGAGTACCTG CGCGAGCGCA AGGCCGACCT CGAGCAGGTG GTCGAGCGGC TGCTGCACCG CATGAAGGGC ACGGCCGCGG TGCTGGCGCC GAGCCCGCCG CGCCGCAAGC GCCCCGCGGC CGAGGAAGAC GACGACCCCA CCGCCGGCGA CGGCATCGAC GCGCCGCTGG TGCTGATCGC GCATGACCTG TCGCCGGCCG ACATGCTCCA GTTCAAGAAG AGCGTGTTCG CCGGCTTCGT GACCGACGTG GGCGGGCGCA CCTCGCACAC CGCGATCGTC GCGCGCAGCA TGGACATTCC GGCCGTGGTG GGCGCGCGCA CCGCGAGCCA GCTGGTGCGC CAGGACGACT GGGTGATCAT CGACGGCGAT GCCGGCGTGG TGATCGTCGA TCCCTCGCCG ATCATCCTGG CCGAGTACGG CTTCAAGCAG CGCCAGGGCG ACCTGGAGCG CGGCCGGCTC GCACGCCTGC GCCACAAGCC CGCGGTGACG CTCGACGGCC AGCGCGTCGA GTTGCTCGCC AACATCGAGA TGCCCGAGGA CACCGTGGGT GCCGTCAAGG CCGGCGCAGT GGGCGTCGGG CTGTTCCGCA GCGAGTTCCT CTTCATGGGC CGCGAGTCGC AGCACCAGAC CCGCCTGCCC GACGAGGAAG AGCAATACCA GGCCTACAAG CGCGCGGTCG AAGGCATGCA GGGCATGCCG GTCACCATCC GCACCATCGA CGTGGGCGCC GACAAGCCGC TCGACGGCAA GGCCGTCAGC AAGCAGGAGC ACCTGAATCC CGCGCTCGGC CTGCGCGCCA TCCGCTGGAG CCTGGCCGAC CCGGCGATGT TCCTCACGCA GCTGCGCGCG ATCCTGCGCG CGGCGGCGCA CGGCGAGATC CACCTGCTGA TTCCCATGCT CGCGCACGTC AGCGAGATCC GCCAGACGCT GTCGCTGATC GACTTCGCGC GCTCGGAGCT CGACAGCCGC GGCGCCGTGT ACGGCAAGGT GAAGCTCGGC GCGATGATCG AGATTCCCGC CGCCGCGCTC ACGCTCAAGA CCTTCCTGAA GTACTTCGAC TTCCTGTCGA TCGGCACCAA CGACCTGATC CAGTACACGC TGGCCATCGA CCGCGCCGAC GAGGCCGTGG CCCACCTCTA CGACCCGGCC CATCCCGCAG TGCTCCGGCT GGTGGCCGAC ACCATTGCCG AATGCCGCCG CCAGGGCAAG AGCGTGGCCG TGTGCGGCGA GATGGCGGGC GACGTGGCCT TCACGCGCCT CTTGCTCGGC CTCGGACTGC GCAGCTTCTC GATGCATCCG TCGCGCATCC TCGCCGTCAA GCAGGAGGTG CTGCGCGCGG ACACCGGCAA GCTCGAGGAA TGGGCCAAGG GCGTGCTCGA GTCGGACGAT CCGGCGTCGG TGCTGGCCGG AAATTAG
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Protein sequence | MTFAVHGLPV ARGIAIGRAV LVVSSRIDVA HYFIKPEEVE TEIDRVRMAR NAVADELAKL QASVALMGPN DAPHELAALL EVHQMLLQDE ALTGGVKHWI TDRLYNAEWA LTTQLEIIAR QFDEMEDEYL RERKADLEQV VERLLHRMKG TAAVLAPSPP RRKRPAAEED DDPTAGDGID APLVLIAHDL SPADMLQFKK SVFAGFVTDV GGRTSHTAIV ARSMDIPAVV GARTASQLVR QDDWVIIDGD AGVVIVDPSP IILAEYGFKQ RQGDLERGRL ARLRHKPAVT LDGQRVELLA NIEMPEDTVG AVKAGAVGVG LFRSEFLFMG RESQHQTRLP DEEEQYQAYK RAVEGMQGMP VTIRTIDVGA DKPLDGKAVS KQEHLNPALG LRAIRWSLAD PAMFLTQLRA ILRAAAHGEI HLLIPMLAHV SEIRQTLSLI DFARSELDSR GAVYGKVKLG AMIEIPAAAL TLKTFLKYFD FLSIGTNDLI QYTLAIDRAD EAVAHLYDPA HPAVLRLVAD TIAECRRQGK SVAVCGEMAG DVAFTRLLLG LGLRSFSMHP SRILAVKQEV LRADTGKLEE WAKGVLESDD PASVLAGN
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