30 homologs were found in PanDaTox collection
for query gene Rcas_4240 on replicon NC_009767
Organism: Roseiflexus castenholzii DSM 13941



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009767  Rcas_4240  CRISPR-associated RAMP Cmr4 family protein family protein  100 
 
 		 328 aa  678    Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.400432  normal  1 
 
 
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NC_011831  Cagg_3826  CRISPR-associated RAMP protein, Cmr4 family  94.98 
 
 		 319 aa  620  1e-176  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.782464  hitchhiker  0.00621555 
 
 
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NC_009523  RoseRS_2589  CRISPR-associated RAMP Cmr4 family protein family protein  67.67 
 
 		 330 aa  451  1e-125  Roseiflexus sp. RS-1  Bacteria  normal  0.598353  normal  0.467768 
 
 
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NC_011059  Paes_1989  CRISPR-associated RAMP protein, Cmr4 family  51.65 
 
 		 332 aa  319  3.9999999999999996e-86  Prosthecochloris aestuarii DSM 271  Bacteria  normal  1  normal  0.48391 
 
 
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NC_007355  Mbar_A1356  hypothetical protein  50.65 
 
 		 321 aa  301  9e-81  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.278075  normal  1 
 
 
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NC_010803  Clim_0933  CRISPR-associated RAMP protein, Cmr4 family  50.15 
 
 		 330 aa  282  5.000000000000001e-75  Chlorobium limicola DSM 245  Bacteria  normal  1  n/a   
 
 
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NC_013385  Adeg_0806  CRISPR-associated RAMP protein, Cmr4 family  42.58 
 
 		 367 aa  228  7e-59  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
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NC_010483  TRQ2_0316  CRISPR-associated RAMP Cmr4 family protein family protein  40.92 
 
 		 324 aa  199  5e-50  Thermotoga sp. RQ2  Bacteria  normal  0.157396  n/a   
 
 
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NC_013385  Adeg_0915  CRISPR-associated RAMP protein, Cmr4 family  40.43 
 
 		 354 aa  184  2.0000000000000003e-45  Ammonifex degensii KC4  Bacteria  normal  0.994799  n/a   
 
 
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NC_011831  Cagg_3812  CRISPR-associated RAMP protein, Cmr4 family  42.12 
 
 		 449 aa  178  1e-43  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  0.458595 
 
 
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NC_009654  Mmwyl1_2690  CRISPR-associated RAMP Cmr4 family protein family protein  26.44 
 
 		 283 aa  69.3  0.00000000008  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
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NC_012793  GWCH70_0318  CRISPR-associated RAMP protein, Cmr4 family  28.29 
 
 		 292 aa  68.2  0.0000000002  Geobacillus sp. WCH70  Bacteria  normal  1  n/a   
 
 
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NC_013411  GYMC61_1196  CRISPR-associated RAMP protein, Cmr4 family  26.42 
 
 		 297 aa  67.4  0.0000000004  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
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NC_013946  Mrub_1482  Cmr4 family CRISPR-associated RAMP protein  23.64 
 
 		 245 aa  57.8  0.0000003  Meiothermus ruber DSM 1279  Bacteria  normal  0.541255  normal  0.493855 
 
 
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NC_009972  Haur_0697  CRISPR-associated RAMP Cmr4 family protein family protein  26.97 
 
 		 293 aa  56.6  0.0000006  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_013205  Aaci_2295  CRISPR-associated RAMP protein, Cmr4 family  27.01 
 
 		 297 aa  55.1  0.000001  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_008025  Dgeo_0962  CRISPR-associated RAMP Cmr4 family protein  25.78 
 
 		 264 aa  54.7  0.000002  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.60167  normal  0.960375 
 
 
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NC_011901  Tgr7_1793  CRISPR-associated RAMP protein, Cmr4 family  27.05 
 
 		 294 aa  52.8  0.000009  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.486311  n/a   
 
 
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NC_008148  Rxyl_0261  CRISPR-associated RAMP Cmr4 family protein family protein  26.75 
 
 		 266 aa  52  0.00001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_014213  Mesil_3378  hypothetical protein  23.08 
 
 		 262 aa  51.2  0.00003  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
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NC_011880  Cyan7425_5330  protein of unknown function DUF324  24.42 
 
 		 272 aa  50.1  0.00005  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  0.10422 
 
 
-
 
NC_010483  TRQ2_1028  CRISPR-associated RAMP Cmr4 family protein family protein  26.36 
 
 		 292 aa  49.3  0.00009  Thermotoga sp. RQ2  Bacteria  normal  1  n/a   
 
 
-
 
NC_009634  Mevan_0108  CRISPR-associated RAMP Cmr4 family protein family protein  22.56 
 
 		 273 aa  47.4  0.0003  Methanococcus vannielii SB  Archaea  normal  0.0120254  n/a   
 
 
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NC_010525  Tneu_0564  CRISPR-associated RAMP Cmr4 family protein family protein  25.26 
 
 		 296 aa  45.1  0.002  Thermoproteus neutrophilus V24Sta  Archaea  normal  0.0596645  hitchhiker  0.00107083 
 
 
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NC_009486  Tpet_1095  CRISPR-associated RAMP Csm3 family protein  31.94 
 
 		 247 aa  43.9  0.003  Thermotoga petrophila RKU-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010483  TRQ2_1011  CRISPR-associated RAMP Csm3 family protein  31.94 
 
 		 247 aa  43.9  0.004  Thermotoga sp. RQ2  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_2477  CRISPR-associated RAMP Csm3 family protein  33.33 
 
 		 255 aa  43.9  0.004  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
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NC_011831  Cagg_3445  CRISPR-associated RAMP protein, Csm3 family  41.18 
 
 		 270 aa  42.7  0.008  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  0.423175 
 
 
-
 
NC_013440  Hoch_1315  CRISPR-associated RAMP protein, Cmr4 family  29.55 
 
 		 327 aa  42.7  0.008  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008553  Mthe_0647  CRISPR-associated RAMP Cmr4 family protein family protein  29.27 
 
 		 267 aa  42.7  0.009  Methanosaeta thermophila PT  Archaea  normal  0.481851  n/a   
 
 
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