39 homologs were found in PanDaTox collection
for query gene Hoch_1315 on replicon NC_013440
Organism: Haliangium ochraceum DSM 14365



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013440  Hoch_1315  CRISPR-associated RAMP protein, Cmr4 family  100 
 
 		 327 aa  659    Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008553  Mthe_0647  CRISPR-associated RAMP Cmr4 family protein family protein  46.01 
 
 		 267 aa  257  2e-67  Methanosaeta thermophila PT  Archaea  normal  0.481851  n/a   
 
 
-
 
NC_008148  Rxyl_0261  CRISPR-associated RAMP Cmr4 family protein family protein  45.81 
 
 		 266 aa  249  5e-65  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_013216  Dtox_2977  CRISPR-associated RAMP protein, Cmr4 family  43.91 
 
 		 273 aa  245  9.999999999999999e-64  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  normal  0.457954 
 
 
-
 
NC_011901  Tgr7_1793  CRISPR-associated RAMP protein, Cmr4 family  34.26 
 
 		 294 aa  154  2e-36  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.486311  n/a   
 
 
-
 
NC_013526  Tter_1949  CRISPR-associated RAMP protein, Cmr4 family  31.79 
 
 		 298 aa  149  5e-35  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  1  n/a   
 
 
-
 
NC_014213  Mesil_3378  hypothetical protein  32.91 
 
 		 262 aa  137  2e-31  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010730  SYO3AOP1_0660  CRISPR-associated RAMP protein, Cmr4 family  28.95 
 
 		 258 aa  135  9.999999999999999e-31  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011899  Hore_15130  CRISPR-associated RAMP protein, Cmr4 family  30.24 
 
 		 325 aa  133  3.9999999999999996e-30  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_013205  Aaci_2295  CRISPR-associated RAMP protein, Cmr4 family  34.39 
 
 		 297 aa  127  2.0000000000000002e-28  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_1196  CRISPR-associated RAMP protein, Cmr4 family  30.45 
 
 		 297 aa  127  4.0000000000000003e-28  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013946  Mrub_1482  Cmr4 family CRISPR-associated RAMP protein  32.7 
 
 		 245 aa  126  4.0000000000000003e-28  Meiothermus ruber DSM 1279  Bacteria  normal  0.541255  normal  0.493855 
 
 
-
 
NC_008025  Dgeo_0962  CRISPR-associated RAMP Cmr4 family protein  32.82 
 
 		 264 aa  120  1.9999999999999998e-26  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.60167  normal  0.960375 
 
 
-
 
NC_009972  Haur_0576  CRISPR-associated RAMP Cmr4 family protein family protein  27.48 
 
 		 278 aa  119  6e-26  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_012793  GWCH70_0318  CRISPR-associated RAMP protein, Cmr4 family  26.58 
 
 		 292 aa  117  3e-25  Geobacillus sp. WCH70  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_0697  CRISPR-associated RAMP Cmr4 family protein family protein  28.79 
 
 		 293 aa  116  5e-25  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_010424  Daud_1820  CRISPR-associated RAMP Cmr4 family protein family protein  32.51 
 
 		 288 aa  113  5e-24  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.303143  n/a   
 
 
-
 
NC_010483  TRQ2_1028  CRISPR-associated RAMP Cmr4 family protein family protein  28.16 
 
 		 292 aa  109  8.000000000000001e-23  Thermotoga sp. RQ2  Bacteria  normal  1  n/a   
 
 
-
 
NC_009616  Tmel_1660  CRISPR-associated RAMP Cmr4 family protein family protein  25.39 
 
 		 276 aa  105  1e-21  Thermosipho melanesiensis BI429  Bacteria  normal  1  n/a   
 
 
-
 
NC_009654  Mmwyl1_2690  CRISPR-associated RAMP Cmr4 family protein family protein  30.26 
 
 		 283 aa  98.6  1e-19  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008789  Hhal_0629  CRISPR-associated RAMP Cmr4 family protein family protein  27.74 
 
 		 304 aa  91.3  2e-17  Halorhodospira halophila SL1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007333  Tfu_1580  CRISPR-associated RAMP Cmr4 family protein family protein  28.31 
 
 		 300 aa  89  9e-17  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_009634  Mevan_0108  CRISPR-associated RAMP Cmr4 family protein family protein  26.05 
 
 		 273 aa  73.2  0.000000000006  Methanococcus vannielii SB  Archaea  normal  0.0120254  n/a   
 
 
-
 
NC_009376  Pars_1117  CRISPR-associated RAMP Cmr4 family protein family protein  27.49 
 
 		 308 aa  70.5  0.00000000004  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  0.163915  normal  1 
 
 
-
 
NC_009073  Pcal_1285  CRISPR-associated RAMP Cmr4 family protein family protein  28.47 
 
 		 306 aa  69.7  0.00000000006  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal  0.0121106 
 
 
-
 
NC_008698  Tpen_1320  CRISPR-associated RAMP Cmr4 family protein family protein  26.07 
 
 		 336 aa  63.2  0.000000005  Thermofilum pendens Hrk 5  Archaea  normal  0.215019  n/a   
 
 
-
 
NC_010525  Tneu_0564  CRISPR-associated RAMP Cmr4 family protein family protein  27.16 
 
 		 296 aa  63.2  0.000000006  Thermoproteus neutrophilus V24Sta  Archaea  normal  0.0596645  hitchhiker  0.00107083 
 
 
-
 
NC_009954  Cmaq_1517  CRISPR-associated RAMP Cmr4 family protein family protein  24.93 
 
 		 317 aa  56.2  0.0000007  Caldivirga maquilingensis IC-167  Archaea  normal  0.476222  normal  1 
 
 
-
 
NC_010803  Clim_0933  CRISPR-associated RAMP protein, Cmr4 family  24.81 
 
 		 330 aa  52  0.00001  Chlorobium limicola DSM 245  Bacteria  normal  1  n/a   
 
 
-
 
NC_002950  PG1985  CRISPR-associated Cmr4 family protein  39.19 
 
 		 233 aa  50.1  0.00005  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.934081 
 
 
-
 
NC_007355  Mbar_A1356  hypothetical protein  27.74 
 
 		 321 aa  48.5  0.0001  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.278075  normal  1 
 
 
-
 
NC_009073  Pcal_0273  CRISPR-associated RAMP Cmr4 family protein family protein  26.49 
 
 		 300 aa  47.8  0.0002  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal  1 
 
 
-
 
NC_013385  Adeg_0806  CRISPR-associated RAMP protein, Cmr4 family  31.06 
 
 		 367 aa  46.6  0.0006  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013385  Adeg_0915  CRISPR-associated RAMP protein, Cmr4 family  25.42 
 
 		 354 aa  46.2  0.0009  Ammonifex degensii KC4  Bacteria  normal  0.994799  n/a   
 
 
-
 
CP001800  Ssol_2351  CRISPR-associated RAMP protein, Cmr4 family  21.94 
 
 		 269 aa  45.4  0.001  Sulfolobus solfataricus 98/2  Archaea  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_3826  CRISPR-associated RAMP protein, Cmr4 family  24.62 
 
 		 319 aa  45.1  0.002  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.782464  hitchhiker  0.00621555 
 
 
-
 
NC_010483  TRQ2_0316  CRISPR-associated RAMP Cmr4 family protein family protein  22.97 
 
 		 324 aa  43.9  0.003  Thermotoga sp. RQ2  Bacteria  normal  0.157396  n/a   
 
 
-
 
NC_011059  Paes_1989  CRISPR-associated RAMP protein, Cmr4 family  21.29 
 
 		 332 aa  43.1  0.007  Prosthecochloris aestuarii DSM 271  Bacteria  normal  1  normal  0.48391 
 
 
-
 
NC_009767  Rcas_4240  CRISPR-associated RAMP Cmr4 family protein family protein  29.55 
 
 		 328 aa  42.7  0.008  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.400432  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>