| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_0564 |
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| Symbol | |
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| ID | 6165739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | + |
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| Start bp | 517471 |
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| End bp | 518361 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641667717 |
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| Product | CRISPR-associated RAMP Cmr4 family protein family protein |
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| Protein accession | YP_001793952 |
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| Protein GI | 171185033 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1336] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
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| TIGRFAM ID | [TIGR02580] CRISPR-associated RAMP protein, Cmr4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0596645 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00107083 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGGCGGGG TCTTGCTTCT ACAGGCGGTA ACCCCTCTAC ACGCGGGGGT GGGCAGGTCC
GAGGCCGCTC ACGTCGATCT GCTGGTGCAG AGGGACGAGT TCGGCCTGCC GGCGATATGG
GCGTCGTCTC TCAAAGGCGC GTTGAAGAGC CACGCCAAGA TGAAGAAGGA CCCCCTTGTC
CACTGCGTCT TTGGCAGAGA CGCGGTTGGG CAGGCTCCCG AGGGGATCTC CGGCGTAACT
CTATTCGACG CGAGGCTCCT CCTCATCCCC GCGAGGAGCC TAAGGGGCGT GTGGATCTAC
GTAACAACGC CGCATATGCT CCGCGCCTTT ATCGTCTACC TGGAGTCTCT TGTCCCCCTC
GGCGTAGAGG GCGCGAAGAC GCTCCTCGAC GTGGCTAAGA AGGCGCTTGA CATATCTAGA
GACGCGCCTG TCGTCTCTTC GCAGAGCTAC CTCTGGGACG GCTCCCTCGT CATAAACGAG
CTGGCTATAA AACAGGCGAA GGTAAACGGC GACTTGGCCA AGTTCACAGA GCAGCTGGCG
AAACACCTCT CGCTCCCCAA GACGGACCTC GCCGTTGTGG GCGACGACAT AGCCAAGACG
CTCGTCGACC GCTCCATGTT GATACAGTAC AGAGTGAGGC TCACCGAGCG GAAGACTGTG
GCAGAGGGCG CCCTCTGGAG CGAGGAGTAT CTGCCCCAGT TCTCAGTCCT CCACTCCGCA
GTCGTGTGCA GAGCGGCAAA GTGCAGAGAG GGAAACGAAG AAAGGCAGCT CAAGGCGGAG
GAGGTGTGTG TAAAGTTCAG AGAGCTTGCG GCGGGCGGCG GGAGGGGCTA CGTCTGGGTC
GGCGGCAAGG AGACAATCGG CAGGGGGCTG GTGGAGGTGG CGCTGGTATG A
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| Protein sequence | MGGVLLLQAV TPLHAGVGRS EAAHVDLLVQ RDEFGLPAIW ASSLKGALKS HAKMKKDPLV
HCVFGRDAVG QAPEGISGVT LFDARLLLIP ARSLRGVWIY VTTPHMLRAF IVYLESLVPL
GVEGAKTLLD VAKKALDISR DAPVVSSQSY LWDGSLVINE LAIKQAKVNG DLAKFTEQLA
KHLSLPKTDL AVVGDDIAKT LVDRSMLIQY RVRLTERKTV AEGALWSEEY LPQFSVLHSA
VVCRAAKCRE GNEERQLKAE EVCVKFRELA AGGGRGYVWV GGKETIGRGL VEVALV
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