| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1117 |
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| Symbol | |
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| ID | 5055789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | - |
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| Start bp | 1006536 |
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| End bp | 1007462 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640468673 |
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| Product | CRISPR-associated RAMP Cmr4 family protein family protein |
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| Protein accession | YP_001153347 |
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| Protein GI | 145591345 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1336] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
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| TIGRFAM ID | [TIGR02580] CRISPR-associated RAMP protein, Cmr4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.163915 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCAGGTA GGTTGTTTTG GGTCCTGGCC TTGACTTCGA TCCACCCAGG AGTTGGACGC
TCGGAGGCGG CCCATGTGGA TCTCCCCGTC CAGAGGGACG AGTTCGGCCT CCCCGCCATA
TGGGCGACGA GCTTGAAGGG GGCTGTTAGG GCTAAGGCGG AGGGGGGCCT ATTCGCGGGG
CCTTACTGTG TCGACGTGGG GAAGAAGGAT GAGTGCGCCA AGGTGATTGC GGCTTTTGGC
CCCAAGCCTG AATACGCATC GGAGCACTCC TCGGCCGTTG CTTTCTTAGA CGCCAAGCTC
TTCGCGGTGC CCGCCCGGTC TTTGAGGGGG GTGTGGATCT ACGTGACGTC CCCCCTCCTC
CTCGGCTTTG CGAAGCTCTA CTCGCAGGCC CTTGGGGTGC CGCTGAGCCT CCCCCAGCTG
CCCACGGTTG GGGAGGGGGA GGTGGCGCTG TCCAGCGGGA GGTTCGCCGA GAACAACGTG
GCGGTGATAA ACGAGATGAA GTTCAAGGTG GTTGGGGAAC AGGCGCCGGC GCTGAATTTG
CCCCCCTTTG ACAAGGTCAA GCAAATAACT GGTTCCGAGC CCGGCTTCGC CGTTGTCAGC
GACCAGGACC TGCCCAGGGT CGTGAGGAGG AGCCTCTTGG TCCAGTACCG CGTGAGGCTT
AAGAAGGAAA CAAAGACGGT TGAGACGGGG CCGTGGAGCG AGGAGTACAT CCCGCCTTTC
ACGGTGTTTA TCACCGGCAT CCACTGCAAC GGCCGGGTTA GGGAGGCGGT GAGGGTTAGG
CTACCCCCGA AGGATGACAA GAAAAACGAG GAGGTGGTGG AGCTGAAGAA TTTCGACCCA
TGCGCCTATG TTGAGTCCAA GGCTAAGGGG CCGCTGTGGA TAGGCGGGAA GGAGACCGTG
GGCAAGGGGC TAGTGGAGAT CCTATGA
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| Protein sequence | MPGRLFWVLA LTSIHPGVGR SEAAHVDLPV QRDEFGLPAI WATSLKGAVR AKAEGGLFAG
PYCVDVGKKD ECAKVIAAFG PKPEYASEHS SAVAFLDAKL FAVPARSLRG VWIYVTSPLL
LGFAKLYSQA LGVPLSLPQL PTVGEGEVAL SSGRFAENNV AVINEMKFKV VGEQAPALNL
PPFDKVKQIT GSEPGFAVVS DQDLPRVVRR SLLVQYRVRL KKETKTVETG PWSEEYIPPF
TVFITGIHCN GRVREAVRVR LPPKDDKKNE EVVELKNFDP CAYVESKAKG PLWIGGKETV
GKGLVEIL
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