| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1820 |
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| Symbol | |
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| ID | 6026857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | - |
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| Start bp | 1923651 |
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| End bp | 1924517 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641594637 |
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| Product | CRISPR-associated RAMP Cmr4 family protein family protein |
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| Protein accession | YP_001717948 |
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| Protein GI | 169831966 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1336] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
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| TIGRFAM ID | [TIGR02580] CRISPR-associated RAMP protein, Cmr4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.303143 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGTGG AGGCACGCTT GCTCTTCGTG TACGCGCTTT CTTCTCTGCA CGCAGGGACG
GAGCAGGGTG TGGGGGTGAT CGATCTCCCA GTGGCCCGCG AAAAGGCTAC GGGCCTGCCT
TACCTTCCTG GCTCTTCCCT TAAGGGGGTA CTGCGCGATG CCTGTAGGGA TAATGAAATG
CGGAAAAAGG TTTTCGGTCC CGATGCCGAT AGCGCCCACG AGCATGCCGG CTCAGTCCAG
ATCTCGGACC AGCGGCTGCT CTTGTTGCCC GTGCGTAGCC TTAAGGGAAC GTTTGCGTGG
GTTACATCAC CCTACATTTT GCGCCGCTTC CTTCGGGATG CAGAAAACGT AGGGGTTTCT
AGCATACCTT CGGGTGTCCC TGTACCCACC CTGGAAACTT CCTGCCTTGT ATCCAATGAC
GGCTCTGCGA TTGTACTGAA CAACCAGGTC ATCCTGGAGG ATCTGGACCT GACCGCCGAA
ACCAATAGCG ATGCGCGCGA GTGGGCAGAG TGGATTGACA GACAGGTTTT CCCGGATGAC
ACCAGCGGGC AGGAGATGCT AAACGCGCGT TTTTGCGTTG TGCATGACGA CGTGATGAGC
TTCCTGCTTG ATACTGCGAC GGAAGTCTTC GCCCGCGTCA GGCTGCGCGA AGACGCAAAA
ACGGTGGAAA CAGGCGGGCT CTGGTACGAA GAGGCCCTGC CGGCAGAGAC GGTTCTTGCG
GGGCTGATAC TCGCGAACCC GGTTAAGGCG AAACCAGATG AGGTGTTTGA AACCTTTAGC
GGGTTAATGG AAAAGCCGCT GCAGTTAGGT GGCAAGGCGA CGGTCGGTCG CGGCCTGTGT
CGCCTTCGGA TGATAGGGGG AAATTAG
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| Protein sequence | MTVEARLLFV YALSSLHAGT EQGVGVIDLP VAREKATGLP YLPGSSLKGV LRDACRDNEM
RKKVFGPDAD SAHEHAGSVQ ISDQRLLLLP VRSLKGTFAW VTSPYILRRF LRDAENVGVS
SIPSGVPVPT LETSCLVSND GSAIVLNNQV ILEDLDLTAE TNSDAREWAE WIDRQVFPDD
TSGQEMLNAR FCVVHDDVMS FLLDTATEVF ARVRLREDAK TVETGGLWYE EALPAETVLA
GLILANPVKA KPDEVFETFS GLMEKPLQLG GKATVGRGLC RLRMIGGN
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