Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_1095 |
Symbol | |
ID | 5171577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 1123449 |
End bp | 1124192 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640563612 |
Product | CRISPR-associated RAMP Csm3 family protein |
Protein accession | YP_001244685 |
Protein GI | 148270225 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1337] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
TIGRFAM ID | [TIGR02582] CRISPR-associated RAMP protein, Csm3 family |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAAAGGC CGATACTCGG AAAGTACATC ATAAAGGGAA AGATCATTCT GGAAACAGGT CTTAGGATCG GAGGTCAGGA GCTCGGTGTG AACATCGGTG GTATAGACAA TCCCGTTATC AGAAATCCTC TCACGGGAGA ACCCTACATC CCCGGAAGCT CTGTGAAAGG AAAGATGAGA AGCCTGATGG AAAGGTTGTT GAATCTGGAT ATATCTGGGA ACAAGGTAAG AAGACACGAA TGCGAAGAAA GGGAATGCAA AGTCTGCAGG GTGTTTGGTT CGACCTCGAA AGAAGGAAAT AACATCCCTT CACGCCTTCT TGTCAGAGAT GCGTTCCTCA CGGAAGATTC GAAAACGAAA CTCCTCAGCA TGGAAACCGA CCTTCCATAC ACGGAATGGA AAACAGAGAA CGCACTGGAC AGAGTCACCT GTAAAGCCGA TCCGAGAAGC TTTGAAAGAA TTCCCGCAGG TGCGGAATTT GAATTCGAGA TCATCTACAC AGCAGAGAAC GAAAAGCACA TAAAGGAAGA CCTCGAAAAT ATAGCCACAG CTCTGGAGCT TCTCGAAGAC GACTATCTCG GTGGAAACGG AAGCAGAGGA TACGGAAAAG TGAAGTTCAG TATAGAAAAA GTGATCTTCA AGAGCGCCGA TTACTACAAA GGAGAGGGAA CACCCGTAGA AAAAGAGGTC AAAGGTGGTG TTGAGGGCTT TAAGAAAGCC ATCCCCGAAA TCGTGAAAGG GTGA
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Protein sequence | MERPILGKYI IKGKIILETG LRIGGQELGV NIGGIDNPVI RNPLTGEPYI PGSSVKGKMR SLMERLLNLD ISGNKVRRHE CEERECKVCR VFGSTSKEGN NIPSRLLVRD AFLTEDSKTK LLSMETDLPY TEWKTENALD RVTCKADPRS FERIPAGAEF EFEIIYTAEN EKHIKEDLEN IATALELLED DYLGGNGSRG YGKVKFSIEK VIFKSADYYK GEGTPVEKEV KGGVEGFKKA IPEIVKG
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