11 homologs were found in PanDaTox collection
for query gene RPD_2801 on replicon NC_007958
Organism: Rhodopseudomonas palustris BisB5



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007958  RPD_2801  transcriptional regulators  100 
 
 		 119 aa  246  6e-65  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.13672  normal  0.117082 
 
 
-
 
NC_011004  Rpal_3201  helix-turn-helix domain protein  62.04 
 
 		 112 aa  145  3e-34  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.526414  n/a   
 
 
-
 
NC_010511  M446_3173  helix-turn-helix domain-containing protein  37.96 
 
 		 112 aa  72  0.000000000003  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  0.0294262 
 
 
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NC_011883  Ddes_0726  putative phage repressor  43.86 
 
 		 225 aa  45.4  0.0003  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.255707  n/a   
 
 
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NC_010513  Xfasm12_0978  XRE family transcriptional regulator  33.72 
 
 		 126 aa  43.9  0.0007  Xylella fastidiosa M12  Bacteria  normal  1  n/a   
 
 
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NC_010577  XfasM23_0860  XRE family transcriptional regulator  33.72 
 
 		 126 aa  43.9  0.0007  Xylella fastidiosa M23  Bacteria  normal  1  n/a   
 
 
-
 
NC_011988  Avi_6165  hypothetical protein  36.23 
 
 		 110 aa  43.9  0.0008  Agrobacterium vitis S4  Bacteria  normal  0.203804  n/a   
 
 
-
 
NC_002939  GSU3324  Cro/CI family transcriptional regulator  36.62 
 
 		 212 aa  42  0.003  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_011661  Dtur_1292  transcriptional regulator, XRE family  40.68 
 
 		 110 aa  42  0.003  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.020008  n/a   
 
 
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NC_007643  Rru_A2140  XRE family transcriptional regulator  36.71 
 
 		 196 aa  41.2  0.005  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_009656  PSPA7_0755  transcriptional regulator PrtR  34.57 
 
 		 256 aa  40  0.01  Pseudomonas aeruginosa PA7  Bacteria  normal  0.011984  n/a   
 
 
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