| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0860 |
|---|
| Symbol | |
|---|
| ID | 6202275 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | - |
|---|
| Start bp | 1009871 |
|---|
| End bp | 1010251 |
|---|
| Gene Length | 381 bp |
|---|
| Protein Length | 126 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641702391 |
|---|
| Product | XRE family transcriptional regulator |
|---|
| Protein accession | YP_001829570 |
|---|
| Protein GI | 182681410 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1396] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTACGTGA GCAAACTTTC CGAACGCGTT CGTGAGGCAC GCAATCTATG CAGTCTGACC
CAGGAGGCAT TGGCCAGTGA TCTTGGGGTT ACACGCAGTG CGGTTGCCCA GTGGGAGATG
GAGCAAGGGA CCAAGCCATC TGTAGAGAAC CTGATTGCCT TGGCGCGCCG TACCGGTATG
GCTTTTGAAT ATCTTTCCAC AGGTCGAGGC AAACCTGATT GTGGGAAACC GATCAGCAGC
ATCTCCGAAC CAACACCGAC CTACCAGAAA TTCGATTCAC AACAAAAGCT GTTGCTGGAA
CAATTTGCCA AACTCACGCC GCGTCAACGC AGCGGGCTGC TCGAATTGCT GGGAACCCCA
TTTGACACAC TGCGCCGATG A
|
|---|
| Protein sequence | MYVSKLSERV REARNLCSLT QEALASDLGV TRSAVAQWEM EQGTKPSVEN LIALARRTGM
AFEYLSTGRG KPDCGKPISS ISEPTPTYQK FDSQQKLLLE QFAKLTPRQR SGLLELLGTP
FDTLRR
|
|---|
| |