13 homologs were found in PanDaTox collection
for query gene RPB_2070 on replicon NC_007778
Organism: Rhodopseudomonas palustris HaA2



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007778  RPB_2070  hypothetical protein  100 
 
 		 338 aa  652    Rhodopseudomonas palustris HaA2  Bacteria  normal  0.434617  normal  1 
 
 
-
 
NC_009523  RoseRS_3974  LmbE family protein  28.68 
 
 		 263 aa  63.5  0.000000004  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.222206 
 
 
-
 
NC_009767  Rcas_1416  LmbE family protein  29.34 
 
 		 272 aa  61.2  0.00000003  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.993291  normal  1 
 
 
-
 
NC_011831  Cagg_3052  LmbE family protein  32.48 
 
 		 269 aa  60.1  0.00000005  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  hitchhiker  0.000237793 
 
 
-
 
NC_009972  Haur_0082  LmbE family protein  30.5 
 
 		 250 aa  54.3  0.000003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_010505  Mrad2831_3591  LmbE family protein  29.09 
 
 		 252 aa  53.9  0.000004  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.682013  hitchhiker  0.00215841 
 
 
-
 
NC_010511  M446_2284  LmbE family protein  33.15 
 
 		 254 aa  50.1  0.00006  Methylobacterium sp. 4-46  Bacteria  normal  0.0970807  normal  0.047773 
 
 
-
 
NC_010725  Mpop_2808  LmbE family protein  30.56 
 
 		 253 aa  47.8  0.0003  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007777  Francci3_3367  hypothetical protein  35.75 
 
 		 248 aa  47  0.0005  Frankia sp. CcI3  Bacteria  normal  1  normal  0.0232623 
 
 
-
 
NC_010172  Mext_2686  LmbE family protein  29.61 
 
 		 253 aa  45.8  0.001  Methylobacterium extorquens PA1  Bacteria  normal  0.218362  normal  1 
 
 
-
 
NC_011757  Mchl_2913  LmbE family protein  29.05 
 
 		 253 aa  45.4  0.001  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.821813  normal  0.173637 
 
 
-
 
NC_007778  RPB_4099  LmbE-like protein  30.52 
 
 		 246 aa  44.7  0.002  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.149754  normal  0.14336 
 
 
-
 
NC_011666  Msil_3594  LmbE family protein  36.45 
 
 		 246 aa  44.3  0.003  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
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