Gene RPB_2070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2070 
Symbol 
ID3909885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2352547 
End bp2353563 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content73% 
IMG OID637883962 
Producthypothetical protein 
Protein accessionYP_485687 
Protein GI86749191 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.434617 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCAG CCGGGCGCAG CATCGAAATC GATCGCTGCG CGCGCGACGC GGTGGCGCTG 
CTGCCGCATG TCGTGCCGCA TCGTGACGGC CTGCAGACGC TCGGCGGCCG AGTGATCGCG
CTGCCGGCGC CGGCCCGCGC GCTGGTCGCG CGCTTTGCCG AGGGGCATGA ATTCGACGAC
GACGAATTGT CGGACAGCGA GCGCGCCGCC GCGCGCGATC TGATCGAGGC CGGCTATCTG
CTGCGTCTGC CGCCGGCCCG GCCGATCGAT CGCGCGGCGC CGGTCGACGT GGTGCTGTCA
CCGCATATCG ACGACGCCGC ATTGTCACTC GGCGGCACCA TCGCGCAGGC ACGACGCCGC
ACGCTGGTGG TCAACGCGTT CACCTCGCAA TCCTATCAGA CCGGGCTGCG CGTGCCGCCC
GAGCGGCTCG ATGCGGTGGC CTGCGCCGAG GATCGTTTGG CCGGCCGTCT GCTCGGCTAC
GATGCCGTCT CGCTCGGCCT CGCCGGCGCG CAGGACCGGC ATCGGCTCGG CCTGTCGGCG
ACGATGGGGT GGCCGCCGCG CGATGTCGCC GATCGGTTTG CGGGCGAGAT CGACGCCGTG
GCGCAGCGCG CCGTGGCGGC GATCCGCAAC GCGCTCGGCC GAGCAGCGAT CGGCAGCCTG
TACGCGCCGG CCGCGATCGG CGGCCATCTC GATCACGTGG TCGTCGCGCT GGCGGGGCCG
GCGATCGCGG CGGCGCTCGG GCTGTCGCCC GGCGCCGTCG CTTACTACGA GGATTTGCCT
TACGCCGCGG CCGGCTGGCG CGGTGGCGTC GAGCTGCGCG AGCGCGCGCC GCGTTTCCGC
GATATCTCCG CCGCGCTGGA GCGCAAGCGC GCGGCGCTGG CGATCTTCAA GACGCGGCTG
CGCGCGCCGC AGATCGAACT CTGCATCGCC CACGCCGCAC GGATTGCGCA GCGCGGCGCG
GTGGAGCGTT GCTATCGGCG CAGCGGCGAT GAAGTGCAAG CGGAGGATGG CGGATGA
 
Protein sequence
MNAAGRSIEI DRCARDAVAL LPHVVPHRDG LQTLGGRVIA LPAPARALVA RFAEGHEFDD 
DELSDSERAA ARDLIEAGYL LRLPPARPID RAAPVDVVLS PHIDDAALSL GGTIAQARRR
TLVVNAFTSQ SYQTGLRVPP ERLDAVACAE DRLAGRLLGY DAVSLGLAGA QDRHRLGLSA
TMGWPPRDVA DRFAGEIDAV AQRAVAAIRN ALGRAAIGSL YAPAAIGGHL DHVVVALAGP
AIAAALGLSP GAVAYYEDLP YAAAGWRGGV ELRERAPRFR DISAALERKR AALAIFKTRL
RAPQIELCIA HAARIAQRGA VERCYRRSGD EVQAEDGG