| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3367 |
|---|
| Symbol | |
|---|
| ID | 3905949 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 3996005 |
|---|
| End bp | 3996751 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 637880690 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_482451 |
|---|
| Protein GI | 86742051 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2120] Uncharacterized proteins, LmbE homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0232623 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGTCGA CGGTGCTGCT GGTGTCCCCG CACCCGGACG ACCTCGCCTG GTCCGTCGGT
GCGACCGTCG CCACGCTGGC CGGCGCGGGA CACGACCTGC ACGCGGTGAC CGTCTTCGGG
CGCAGCCGCT ATGCGCCGGG GTCGGCGGCG CACGGGGACG CCGCCTCGGT CACCGCGCTG
CGTACGGCCG AGGACGCGGC GTGGGCCGAC CGGCATGCCG GCGCCGCCCT GGTGTCGTTG
CGGCTACCGG ACGCCAGCCT GCGCGGGTAC ACGGACGACA CGGAGATGGG TGCTGCCGCC
GACCCCGGGC TGGTCCGCCG GGTGGCCGAC GGGCTGGCCG CGCTGGCGGC CGCCGTGCGG
CCGCGGTTCC TGCTGGCCCC GATGGCCGTC GGCGGCCATG TCGATCACGA GGTGGTCCGC
CGGGCGGTGG ACGCGGTGGC CCCCTGCCTC GTCCCGGAAC CCTCGGTGGT CTGGTACGCC
GACCTGCCCT ACGCCGCGGC GACCGGCCCG GCGCCGACGC GGGCCGGGAC CCTCGTGGCG
GCCGGTCCGT ACCGGCGGGC CATCGAGCGC GGGGTGCTGT ACTACCCCTC CCAGCTGCCC
GGCGAGCACC TGCCCGTCCT GCACCGGTAC CTCGCGGCGG AAGGCGGTGA GCGGCTGCGC
ACCGACGAAC CATGGGCGAC CGAGGCCCTG GCCAACCTGC TCGGTCGAGC GGACCTGTCG
GACACGAGAT TCGGAGCCCA GCGATGA
|
|---|
| Protein sequence | MGSTVLLVSP HPDDLAWSVG ATVATLAGAG HDLHAVTVFG RSRYAPGSAA HGDAASVTAL
RTAEDAAWAD RHAGAALVSL RLPDASLRGY TDDTEMGAAA DPGLVRRVAD GLAALAAAVR
PRFLLAPMAV GGHVDHEVVR RAVDAVAPCL VPEPSVVWYA DLPYAAATGP APTRAGTLVA
AGPYRRAIER GVLYYPSQLP GEHLPVLHRY LAAEGGERLR TDEPWATEAL ANLLGRADLS
DTRFGAQR
|
|---|
| |