32 homologs were found in PanDaTox collection
for query gene PsycPRwf_R0035 on replicon NC_009524
Organism: Psychrobacter sp. PRwf-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009524  PsycPRwf_R0035  SRP RNA; RNA component of signal recognition particle  100 
 
 		 114 bp  226  9e-58  Psychrobacter sp. PRwf-1  Bacteria  normal  1  normal  0.151839 
 
 
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NC_007204  Psyc_R0030  SRP RNA; RNA component of signal recognition particle  91.84 
 
 		 114 bp  131  4.0000000000000003e-29  Psychrobacter arcticus 273-4  Bacteria  normal  0.313104  hitchhiker  0.000018038 
 
 
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NC_007969  Pcryo_R0034  SRP RNA; RNA component of signal recognition particle  90.82 
 
 		 114 bp  123  9.999999999999999e-27  Psychrobacter cryohalolentis K5  Bacteria  normal  0.157836  normal  1 
 
 
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NC_007912  Sde_R0021  SRP RNA; RNA component of signal recognitionparticle  95.12 
 
 		 110 bp  65.9  0.000000002  Saccharophagus degradans 2-40  Bacteria  normal  1  normal  1 
 
 
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NC_011831  Cagg_R0020  SRP RNA; RNA component of signal recognitionparti cle  96.97 
 
 		 95 bp  58  0.0000005  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.0000038101  normal  1 
 
 
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NC_007963  Csal_R0046  SRP RNA; RNA component of signal recognition particle  94.44 
 
 		 118 bp  56  0.000002  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
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NC_011891  A2cp1_R0054  SRP RNA; RNA component of signal recognitionparti cle  94.29 
 
 		 109 bp  54  0.000008  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.0792921  n/a   
 
 
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NC_011145  AnaeK_R0054  SRP RNA; RNA component of signal recognitionparti cle  94.29 
 
 		 109 bp  54  0.000008  Anaeromyxobacter sp. K  Bacteria  normal  0.431855  n/a   
 
 
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NC_010571  Oter_R0072    96.77 
 
 		 103 bp  54  0.000008  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.379249 
 
 
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NC_009635  Maeo_R0035  SRP RNA; RNA component of signal recognition particle  94.29 
 
 		 308 bp  54  0.000008  Methanococcus aeolicus Nankai-3  Archaea  normal  1  n/a   
 
 
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NC_009523  RoseRS_R0002  SRP RNA; RNA component of signal recognition particle  94.29 
 
 		 94 bp  54  0.000008  Roseiflexus sp. RS-1  Bacteria  normal  0.950966  normal  1 
 
 
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NC_009727  CBUD_0669a  hypothetical protein  94.12 
 
 		 165 bp  52  0.00003  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  1  n/a   
 
 
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NC_010117  COXBURSA331_A2225  bacterial signal recognition particle RNA  94.12 
 
 		 100 bp  52  0.00003  Coxiella burnetii RSA 331  Bacteria  normal  0.101315  n/a   
 
 
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NC_013501  Rmar_R0038  SRP RNA; RNA component of signal recognitionparti cle  94.12 
 
 		 108 bp  52  0.00003  Rhodothermus marinus DSM 4252  Bacteria  normal  0.263697  n/a   
 
 
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NC_013522  Taci_R0008  SRP RNA; RNA component of signal recognition particle  94.12 
 
 		 114 bp  52  0.00003  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  hitchhiker  0.0000000137936  n/a   
 
 
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NC_008009  Acid345_R0021  SRP RNA; RNA component of signal recognition particle  92.11 
 
 		 114 bp  52  0.00003  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
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NC_009767  Rcas_R0008  SRP RNA; RNA component of signal recognition particle  93.94 
 
 		 95 bp  50.1  0.0001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.313819  normal  0.0100714 
 
 
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NC_012034  Athe_R0010  SRP RNA; RNA component of signal recognition particle  93.94 
 
 		 92 bp  50.1  0.0001  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.0000000000232176  n/a   
 
 
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NC_013422  Hneap_R0025  SRP RNA; RNA component of signal recognition particle  93.94 
 
 		 118 bp  50.1  0.0001  Halothiobacillus neapolitanus c2  Bacteria  normal  1  n/a   
 
 
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NC_011901  Tgr7_R0017  SRP RNA; RNA component of signal recognitionparti cle  93.94 
 
 		 118 bp  50.1  0.0001  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  1  n/a   
 
 
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NC_011126  HY04AAS1_R0018  SRP RNA; RNA component of signal recognition particle  93.94 
 
 		 83 bp  50.1  0.0001  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  1  n/a   
 
 
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NC_010655  Amuc_R0031    93.94 
 
 		 106 bp  50.1  0.0001  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009675  Anae109_R0052  SRP RNA; RNA component of signal recognition particle  93.94 
 
 		 111 bp  50.1  0.0001  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.270066  normal  0.727224 
 
 
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NC_007760  Adeh_R0053  SRP RNA; RNA component of signal recognition particle  93.94 
 
 		 112 bp  50.1  0.0001  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.148167  n/a   
 
 
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NC_010577  XfasM23_R0019    93.75 
 
 		 115 bp  48.1  0.0005  Xylella fastidiosa M23  Bacteria  normal  0.133549  n/a   
 
 
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NC_010513  Xfasm12_R0019  SRP RNA; RNA component of signal recognition particle  93.75 
 
 		 115 bp  48.1  0.0005  Xylella fastidiosa M12  Bacteria  hitchhiker  0.000590922  n/a   
 
 
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NC_008609  Ppro_R0001  SRP RNA; RNA component of signal recognition particle  93.55 
 
 		 106 bp  46.1  0.002  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00137398  n/a   
 
 
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NC_011886  Achl_R0008  SRP RNA; RNA component of signal recognitionparti cle  96.15 
 
 		 90 bp  44.1  0.007  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  1 
 
 
-
 
NC_012803  Mlut_02680  Bacterial signal recognition particle RNA  96.15 
 
 		 100 bp  44.1  0.007  Micrococcus luteus NCTC 2665  Bacteria  normal  0.218549  n/a   
 
 
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NC_011661  Dtur_R0033  SRP RNA; RNA component of signal recognitionparti cle  91.18 
 
 		 90 bp  44.1  0.007  Dictyoglomus turgidum DSM 6724  Bacteria  normal  1  n/a   
 
 
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NC_013525  Tter_R0006  SRP RNA; RNA component of signal recognitionparti cle  91.18 
 
 		 103 bp  44.1  0.007  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013889  TK90_R0044  SRP RNA; RNA component of signal recognition particle  93.33 
 
 		 119 bp  44.1  0.007  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0198539  normal  0.360014 
 
 
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