8 homologs were found in PanDaTox collection
for query gene RoseRS_R0002 on replicon NC_009523
Organism: Roseiflexus sp. RS-1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009523  RoseRS_R0002  SRP RNA; RNA component of signal recognition particle  100 
 
 		 94 bp  186  6e-46  Roseiflexus sp. RS-1  Bacteria  normal  0.950966  normal  1 
 
 
-
 
NC_009767  Rcas_R0008  SRP RNA; RNA component of signal recognition particle  97.75 
 
 		 95 bp  161  4e-38  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.313819  normal  0.0100714 
 
 
-
 
NC_011831  Cagg_R0020  SRP RNA; RNA component of signal recognitionparti cle  95.52 
 
 		 95 bp  109  1e-22  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.0000038101  normal  1 
 
 
-
 
NC_010655  Amuc_R0031    100 
 
 		 106 bp  65.9  0.000000002  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009524  PsycPRwf_R0035  SRP RNA; RNA component of signal recognition particle  94.29 
 
 		 114 bp  54  0.000006  Psychrobacter sp. PRwf-1  Bacteria  normal  1  normal  0.151839 
 
 
-
 
NC_009635  Maeo_R0035  SRP RNA; RNA component of signal recognition particle  90.48 
 
 		 308 bp  52  0.00002  Methanococcus aeolicus Nankai-3  Archaea  normal  1  n/a   
 
 
-
 
NC_011661  Dtur_R0033  SRP RNA; RNA component of signal recognitionparti cle  91.18 
 
 		 90 bp  44.1  0.006  Dictyoglomus turgidum DSM 6724  Bacteria  normal  1  n/a   
 
 
-
 
NC_013525  Tter_R0006  SRP RNA; RNA component of signal recognitionparti cle  91.18 
 
 		 103 bp  44.1  0.006  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>