7 homologs were found in PanDaTox collection
for query gene Rcas_R0008 on replicon NC_009767
Organism: Roseiflexus castenholzii DSM 13941



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009767  Rcas_R0008  SRP RNA; RNA component of signal recognition particle  100 
 
 		 95 bp  188  2e-46  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.313819  normal  0.0100714 
 
 
-
 
NC_009523  RoseRS_R0002  SRP RNA; RNA component of signal recognition particle  97.75 
 
 		 94 bp  161  4e-38  Roseiflexus sp. RS-1  Bacteria  normal  0.950966  normal  1 
 
 
-
 
NC_011831  Cagg_R0020  SRP RNA; RNA component of signal recognitionparti cle  92.54 
 
 		 95 bp  93.7  7e-18  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.0000038101  normal  1 
 
 
-
 
NC_010655  Amuc_R0031    100 
 
 		 106 bp  69.9  0.0000000001  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009675  Anae109_R0052  SRP RNA; RNA component of signal recognition particle  90.48 
 
 		 111 bp  52  0.00002  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.270066  normal  0.727224 
 
 
-
 
NC_009524  PsycPRwf_R0035  SRP RNA; RNA component of signal recognition particle  93.94 
 
 		 114 bp  50.1  0.0001  Psychrobacter sp. PRwf-1  Bacteria  normal  1  normal  0.151839 
 
 
-
 
NC_007760  Adeh_R0053  SRP RNA; RNA component of signal recognition particle  89.74 
 
 		 112 bp  46.1  0.002  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.148167  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>