15 homologs were found in PanDaTox collection
for query gene Psyc_R0030 on replicon NC_007204
Organism: Psychrobacter arcticus 273-4



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007204  Psyc_R0030  SRP RNA; RNA component of signal recognition particle  100 
 
 		 114 bp  226  9e-58  Psychrobacter arcticus 273-4  Bacteria  normal  0.313104  hitchhiker  0.000018038 
 
 
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NC_007969  Pcryo_R0034  SRP RNA; RNA component of signal recognition particle  98.25 
 
 		 114 bp  210  6e-53  Psychrobacter cryohalolentis K5  Bacteria  normal  0.157836  normal  1 
 
 
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NC_009524  PsycPRwf_R0035  SRP RNA; RNA component of signal recognition particle  91.84 
 
 		 114 bp  131  4.0000000000000003e-29  Psychrobacter sp. PRwf-1  Bacteria  normal  1  normal  0.151839 
 
 
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NC_010571  Oter_R0072    100 
 
 		 103 bp  52  0.00003  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.379249 
 
 
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NC_013889  TK90_R0044  SRP RNA; RNA component of signal recognition particle  94.12 
 
 		 119 bp  52  0.00003  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0198539  normal  0.360014 
 
 
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NC_008009  Acid345_R0021  SRP RNA; RNA component of signal recognition particle  93.94 
 
 		 114 bp  50.1  0.0001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
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NC_011831  Cagg_R0020  SRP RNA; RNA component of signal recognitionparti cle  96.55 
 
 		 95 bp  50.1  0.0001  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.0000038101  normal  1 
 
 
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NC_011071  Smal_R0031  SRP RNA; RNA component of signal recognition particle  93.75 
 
 		 115 bp  48.1  0.0005  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  1 
 
 
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NC_011126  HY04AAS1_R0018  SRP RNA; RNA component of signal recognition particle  91.43 
 
 		 83 bp  46.1  0.002  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  1  n/a   
 
 
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NC_011728  BbuZS7_0472  Bacterial signal recognition particle RNA  91.43 
 
 		 100 bp  46.1  0.002  Borrelia burgdorferi ZS7  Bacteria  normal  1  n/a   
 
 
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NC_011901  Tgr7_R0017  SRP RNA; RNA component of signal recognitionparti cle  91.43 
 
 		 118 bp  46.1  0.002  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  1  n/a   
 
 
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NC_012034  Athe_R0010  SRP RNA; RNA component of signal recognition particle  91.43 
 
 		 92 bp  46.1  0.002  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.0000000000232176  n/a   
 
 
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NC_013422  Hneap_R0025  SRP RNA; RNA component of signal recognition particle  91.43 
 
 		 118 bp  46.1  0.002  Halothiobacillus neapolitanus c2  Bacteria  normal  1  n/a   
 
 
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NC_008541  Arth_R0009  SRP RNA; RNA component of signal recognition particle  96.15 
 
 		 90 bp  44.1  0.007  Arthrobacter sp. FB24  Bacteria  normal  0.408467  n/a   
 
 
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NC_013522  Taci_R0008  SRP RNA; RNA component of signal recognition particle  93.33 
 
 		 114 bp  44.1  0.007  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  hitchhiker  0.0000000137936  n/a   
 
 
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