10 homologs were found in PanDaTox collection
for query gene Smal_R0031 on replicon NC_011071
Organism: Stenotrophomonas maltophilia R551-3



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011071  Smal_R0031  SRP RNA; RNA component of signal recognition particle  100 
 
 		 115 bp  228  2e-58  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  1 
 
 
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NC_010513  Xfasm12_R0019  SRP RNA; RNA component of signal recognition particle  86.96 
 
 		 115 bp  109  2e-22  Xylella fastidiosa M12  Bacteria  hitchhiker  0.000590922  n/a   
 
 
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NC_010577  XfasM23_R0019    86.96 
 
 		 115 bp  109  2e-22  Xylella fastidiosa M23  Bacteria  normal  0.133549  n/a   
 
 
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NC_013501  Rmar_R0038  SRP RNA; RNA component of signal recognitionparti cle  100 
 
 		 108 bp  58  0.0000005  Rhodothermus marinus DSM 4252  Bacteria  normal  0.263697  n/a   
 
 
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NC_007204  Psyc_R0030  SRP RNA; RNA component of signal recognition particle  93.75 
 
 		 114 bp  48.1  0.0005  Psychrobacter arcticus 273-4  Bacteria  normal  0.313104  hitchhiker  0.000018038 
 
 
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NC_007969  Pcryo_R0034  SRP RNA; RNA component of signal recognition particle  93.75 
 
 		 114 bp  48.1  0.0005  Psychrobacter cryohalolentis K5  Bacteria  normal  0.157836  normal  1 
 
 
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NC_008009  Acid345_R0021  SRP RNA; RNA component of signal recognition particle  93.75 
 
 		 114 bp  48.1  0.0005  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
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NC_013530  Xcel_0028  ABC transporter related protein  100 
 
 		 1887 bp  48.1  0.0005  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
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NC_013889  TK90_R0044  SRP RNA; RNA component of signal recognition particle  93.75 
 
 		 119 bp  48.1  0.0005  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0198539  normal  0.360014 
 
 
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NC_007520  Tcr_R0008  SRP RNA; RNA component of signal recognitionparticle  85.19 
 
 		 115 bp  44.1  0.008  Thiomicrospira crunogena XCL-2  Bacteria  unclonable  7.72786e-17  n/a   
 
 
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