7 homologs were found in PanDaTox collection
for query gene PputW619_3862 on replicon NC_010501
Organism: Pseudomonas putida W619



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010322  PputGB1_4069  parallel beta-helix repeat-containing protein  89.44 
 
 		 490 aa  830    Pseudomonas putida GB-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010501  PputW619_3862  3-dehydroshikimate dehydratase (DHS dehydratase) (DHSase)  100 
 
 		 489 aa  986    Pseudomonas putida W619  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008255  CHU_3450  hypothetical protein  26.54 
 
 		 5453 aa  89  2e-16  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  1  normal  0.119049 
 
 
-
 
NC_012029  Hlac_1722  copper-binding protein  28.63 
 
 		 711 aa  56.6  0.000001  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  0.0146255  normal  1 
 
 
-
 
NC_008254  Meso_3138  parallel beta-helix repeat-containing protein  31.13 
 
 		 1469 aa  45.4  0.002  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013037  Dfer_0695  periplasmic copper-binding  22.47 
 
 		 417 aa  44.7  0.003  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.16971  normal  1 
 
 
-
 
NC_008553  Mthe_1273  parallel beta-helix repeat-containing protein  27.7 
 
 		 510 aa  43.5  0.009  Methanosaeta thermophila PT  Archaea  normal  0.429071  n/a   
 
 
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