| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_3138 |
|---|
| Symbol | |
|---|
| ID | 4183091 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 3405598 |
|---|
| End bp | 3410007 |
|---|
| Gene Length | 4410 bp |
|---|
| Protein Length | 1469 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638069030 |
|---|
| Product | parallel beta-helix repeat-containing protein |
|---|
| Protein accession | YP_675675 |
|---|
| Protein GI | 110635467 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01451] conserved repeat domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTAAAG GCCGCAGTTG GCTAACGCTG CTTGCACCTC ATCCCTTTTT TCGCAGGCGA
GACGATGCCC AGCCAAAGCG CTACAGGCGA TGGGCTGTTC GTATATCGGC ATCTTTGACC
ATGCTTATAT CCGCCTGCCT CGCCAGCAGT GACGCCTTGG CCGTATTGTC ATCGGCTGGC
AGCTGGTCCG GCAGTGTTGG CGTGAGCGTT GACGGAATTG GCAGCAACAC AAGTCCTGTG
GGAACAGTTC AGGCAGTCAT TCCCGTCGGC TCCACCATTT TGAGAGCGTA TCTCTACAGT
ACCAGCAGAT CTTCGCCGAG CACGCTTGCC GAGTTCAATA GTGAAGGTAT CACCCTGGCT
GGGCAGAGCG TCACCTTCAC GCACCTGATC AGCAACAGCA CCGCATGGAA CTTCTTTGTC
GCGCGGGCAG ATGTGACTTC ACTTGTGCGC ACACTGACAG CCAACGCAAC CACCAGCAAC
TTCAACTGGA CTGTGACGGA AGGAGCCAGG AACGCCAATA TCGACGGCGA GGTTCTGGCT
ATTGTCTATT CCCATCCTAA CCTTCCCCCC GCGAGTGTCG CCTTTTTCGA CGGAGGTCTC
AGCACAACGG GTGAAACCGC TGTCATGTCG CTGGGGGCAG CCGCGATGAA CCCTGCGAGC
GCCGCCTTCC GAGGCGAACT CGGCGTCGCG ATCTCCTTCA GTTGCTGCAA TCAGTTGTCG
ACGATCAGCA TCAACGGGTC CACCATATCC AATTTCGCGG GCAACTTTGA TGATGGATTG
AGCCAAGCCA ACGGCGCCTT GATTACCGTC GGCGGCGTGG GTGATCCGGC CGTCAGCAAT
CCAGCCAATT ACGATAGCGA TCACGAACTT TACGATTTGC GTTCCTATAT CAGGACCGGG
GACCGGTCCG TTACGATTTT CGCGCAGAAC CCCACAAATG ATGACAACCT CTTCTTCATT
CATGCCTATG TTCGCACAGC AGGCATCAGA GGAACGGTCT TTGAGGATAC GGCGGGCAAC
CTGCTTGCTG ATGGAAGCAT AGGCACGGCA AGAAACCGCG GTATAAGCGG CGTCACAGTA
CGGTTGTTCG ACAACGCAGG GACGCAAATC GGCGCAACCC AAACAGAAGC CGACGGTACA
TATCTGTTCC CATCTGTTCC GGCACCCGGC ACCTACTATG TCGCGGTTGA TGCGCCGACG
GTGAGTGCGG CGGGGACGTC CGGCGTTGTT GGTGAGCAGA CCTATGCGCG GGCGGGAAGC
GGGAACACCG GCGCGGCGGG GGGCGCGGGC TACGGGACCC TTTGCGTCAG CACCAATGGC
AGTTACACCC AGCAGAACGC CACCACCACC TCCGGCGCGG CCGGCAACCC GGCCAATGGC
GCCTGCTATG GCGGCCGGCG CGGCGCCACG GCCGATAGCG GGACCACGGC GCTTAATTTC
AAAGAGCATG TGATCCGGGT CGTGACGGAC GCGGGCAGCC CGGTCACCAA TGTCGATTTC
GGCTTTTCCT TCAATGTCGT GACCAATGTG AACGACAGCG GGCAGGGGTC CGTGCGCCAG
TTCATCGCCA ACGCCAACGC GATCACCGCG GCCTCCGGCG GCGGGGGCGA ACCCGATGCG
GGCGCCAATG TCCTGCGCTT CGTGCCGGCG CTTGCCATGA ATGGCAGCGA CTGGTGGCAG
GTCGCTCCCA CCGCACCATT GCCGGCGATC GGCGGGCCGC GAACGACCAT CGACGGCAGG
GCCTATGACA ATGCCAACGG AACGTCGGCG CTTCTTCGAG GCGCGGTCGG AACGGGCGGG
CTGGTGGGGG CGGACTGGAA TCCGCTCGTC CTCAGCCAGG TGGCAAGCCC GAAGCTGGCC
CTGGCCAACG GGCTCACGGC CGACGCGCTC ACCATCGCCG CGGGCGCGAA CGACACCACC
ATCCAGAATC TCGGCGTCTT CGGAACGACG GCAAGCGCCG GCGGCGGCAT CGCCAAAACG
GCAACGGGGA CGATCACGGG CCTGCTCGTG CGCGGCAATG TCCTTGGCGT TTTGCCGAAT
GGCGGGGCAG CCGCCGGAAC TTTGCAATTC GGCCTGCAGA TAGCCAATAC GGCCAATGGC
CGGTTCGAGA TTTCGAACAA CTATATCGAA GGCCCGCGGG AGGCGGGCAT CCTGGTGGAC
AGCGTCACCC ACACGACGCC CGGAAACTAC ATCATCAGCA ACAATGAGGT GGCGGATACG
GGCTCCGACG GCATCCAGCT GCCCGGCTCC TCGCGTGTCT CCCTGCAAGG CAATCTTGTG
GCCCGTTCGG GCATGGTGGG GATCGAGCTT TGGGAGAACG GCGGCAACAA TCTCTTGACC
CAGAACACCG TCACCGACGG CCGCGGGACG GGAGCCGAGG GCGCGGGCGT GCGCCTCACC
CTCGGCTCCA ACAACACGGT GACCTTCAAC AAGCTGGAGG GCAATACGGG CGGGCCTGGA
ATTCTCCAGC GCAACACCAG CATGGGCAAC CTGCTGAGCC GCAACCAGTT CGGCGGCAAT
GCCGGCGTTG CGATCGACAA TACGCCGGGC GATGCGCCCG ACGGGGTGAC GGTCTCCTCG
GCCTGCGCGG TAAACGGCAC CCAGCTCGGC CGGCCGGTGC TTTCCTCGGC CATCCTTGTC
GACAACACGC TGCGGCTTGA GGGCAGCTAT TGCGGCACCG GCACCTACAG GCTGGAGCTC
TACAAGGTGG CGCCCGGCAG CACGGGAGAT ATGGGCGCCG ACGGCTTGCA GGCGGGCGAG
GGCGGAACCT TCCTGGCCGC GCTGACGGGG CTTTCCGGCG GCACGCTCGA CGAGACGCTT
TCCCCCGCTC CGGGCAATCT CATCGCCGGC TCGGACCATC TCACCGCCAT CCTGATCCGC
GAGACGGCCA CCGGCGGGGC CGTCGGCGAC ACGTCCGAGT TCAGCGCCAA TGTCCTGGTC
GTCTCCGTGC CGTTCGTCAC CCTTGCCAAG GTGAGCGTCG GCGGGACGGG CAGCTTCATC
TTCAACGGCT CGGCGGCCAA CGCCAACGGC TTTCCGACCG ACGACACCTA TTCGCTCGCC
ACGACGGCGC AGGACGTGGC CGTGGAAGGG GCGCCGGTGC CGCTTGCCGC CGCCGATGTC
GCCACCGAGA TCGTCGAAGG GGTGCCGCCG GGCTGGGTGC TGGAGACCGC CCGCTGCGAG
GACCGCCGGG CCGCCACGAC CGGCAATCCG GTGGGCCCGG TGATCGGCTC GGTCAGCGAC
GGCAGGACGC TTGTCATCCC CGCCGCAAAC GCCAGGGCGG GGGCGGACCT TTTGTGCACC
TTCAGCAACC GCTTTGCCGG CTTTGCCGTC ACCGGGCGGG TGATCGAGGA CAATGGCGCC
GGCGGCGGCA CCGCCCATGA CGGCCATCAG AACGGGACGG AAAAGGGTCT CGGCGCCGTC
CTCCTGCGGC TGACCGATTG CGCCAGCCAT GACTATGCCA GGGCGGAAAG CGATGCGGCG
GGCAATTTCT CGCTCAGCCT TGCCGGCGTG CCGGCAAACA CCGACATTTG CCTGGTGCGC
GACCCGGTGG CCGGGCATCT GGGCGTCAGC GGCCAGCCCG GCACGACCGG CGGCACGATG
ACCGGCTACA ACCTGCTGCG CTTCAGGCCG GCGGCCGACA CCAGCTATCA CGACGTCGTT
TTCGGTCTGA TCGCCGTGCC GCAGCTCGTG TCGGGCACGG CGGCGGCGGT GCCGCCGGGC
GGCGCGACGA TGATCGCCCA CCGCTACACC GCCACCACCA CGGCGGCGGT CTCCTTCACG
CTCACGGATG TGACGGGAAC GCCGGACGCG GCGCTTTTTT CCACAACCCT CTTTCACGAT
GCGGACTGCT CGGGCGAGCT GGCGGCCGGC GAGGGGCCGC CGCCGGCGCC GGCCGCGGTC
CAGGCCGGCG ACGTGATCTG CCTGTTCGTG CGGACAGAGG CGCTGGATTC GGTTCCCCCC
GGCGGCGAGC TCGCCTACAC GCTTGCCGCC GCCACCGCCC TTTCCGGCAC GCAGGCCGTG
CTGGAGCCGG CCGCCAACCA GGACAAGGTC ACGGTGGCGA CCGGCAGCGT CACCGTCACC
AAGAGGGTGC GCAATGTGAC GCGCAACGGC AGCTTCGCCG CCTCCGGCAC CGGCGCGCCG
GGGGATGTGC TGGAATATTC CATCATCTTC AGCAATCCCT CGCCCGGCGC CGTCAGCCAT
GTCCAGGTGC ATGACAAGAC GCCCAGCTAC ACCACCCTTT CCGCGCCGAT GACGGTGGTG
CAGGACCCGG CGAGCCTCGA CTGCGCCCCC GCCGTGCCGC CGGCCGGCGG AACCGCCGGC
TATCGGGGCA TCCTGCGCTG GGACTGCACC GGAACCATGC TCCCCGGCGA CCAGGGCGAG
GTCTCCTTCA AGGTCACCAT CGATCAGTGA
|
|---|
| Protein sequence | MLKGRSWLTL LAPHPFFRRR DDAQPKRYRR WAVRISASLT MLISACLASS DALAVLSSAG
SWSGSVGVSV DGIGSNTSPV GTVQAVIPVG STILRAYLYS TSRSSPSTLA EFNSEGITLA
GQSVTFTHLI SNSTAWNFFV ARADVTSLVR TLTANATTSN FNWTVTEGAR NANIDGEVLA
IVYSHPNLPP ASVAFFDGGL STTGETAVMS LGAAAMNPAS AAFRGELGVA ISFSCCNQLS
TISINGSTIS NFAGNFDDGL SQANGALITV GGVGDPAVSN PANYDSDHEL YDLRSYIRTG
DRSVTIFAQN PTNDDNLFFI HAYVRTAGIR GTVFEDTAGN LLADGSIGTA RNRGISGVTV
RLFDNAGTQI GATQTEADGT YLFPSVPAPG TYYVAVDAPT VSAAGTSGVV GEQTYARAGS
GNTGAAGGAG YGTLCVSTNG SYTQQNATTT SGAAGNPANG ACYGGRRGAT ADSGTTALNF
KEHVIRVVTD AGSPVTNVDF GFSFNVVTNV NDSGQGSVRQ FIANANAITA ASGGGGEPDA
GANVLRFVPA LAMNGSDWWQ VAPTAPLPAI GGPRTTIDGR AYDNANGTSA LLRGAVGTGG
LVGADWNPLV LSQVASPKLA LANGLTADAL TIAAGANDTT IQNLGVFGTT ASAGGGIAKT
ATGTITGLLV RGNVLGVLPN GGAAAGTLQF GLQIANTANG RFEISNNYIE GPREAGILVD
SVTHTTPGNY IISNNEVADT GSDGIQLPGS SRVSLQGNLV ARSGMVGIEL WENGGNNLLT
QNTVTDGRGT GAEGAGVRLT LGSNNTVTFN KLEGNTGGPG ILQRNTSMGN LLSRNQFGGN
AGVAIDNTPG DAPDGVTVSS ACAVNGTQLG RPVLSSAILV DNTLRLEGSY CGTGTYRLEL
YKVAPGSTGD MGADGLQAGE GGTFLAALTG LSGGTLDETL SPAPGNLIAG SDHLTAILIR
ETATGGAVGD TSEFSANVLV VSVPFVTLAK VSVGGTGSFI FNGSAANANG FPTDDTYSLA
TTAQDVAVEG APVPLAAADV ATEIVEGVPP GWVLETARCE DRRAATTGNP VGPVIGSVSD
GRTLVIPAAN ARAGADLLCT FSNRFAGFAV TGRVIEDNGA GGGTAHDGHQ NGTEKGLGAV
LLRLTDCASH DYARAESDAA GNFSLSLAGV PANTDICLVR DPVAGHLGVS GQPGTTGGTM
TGYNLLRFRP AADTSYHDVV FGLIAVPQLV SGTAAAVPPG GATMIAHRYT ATTTAAVSFT
LTDVTGTPDA ALFSTTLFHD ADCSGELAAG EGPPPAPAAV QAGDVICLFV RTEALDSVPP
GGELAYTLAA ATALSGTQAV LEPAANQDKV TVATGSVTVT KRVRNVTRNG SFAASGTGAP
GDVLEYSIIF SNPSPGAVSH VQVHDKTPSY TTLSAPMTVV QDPASLDCAP AVPPAGGTAG
YRGILRWDCT GTMLPGDQGE VSFKVTIDQ
|
|---|
| |