Gene Hlac_1722 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1722 
Symbol 
ID7400479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1739212 
End bp1741347 
Gene Length2136 bp 
Protein Length711 aa 
Translation table11 
GC content72% 
IMG OID643708789 
Productcopper-binding protein 
Protein accessionYP_002566375 
Protein GI222480138 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3420] Nitrous oxidase accessory protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0146255 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCGTT TCGATCCCTA CGGCGACCTG CCTCGCGCGC TCCGAATCGC GCTCGTCGCG 
CTCCTCCTCG TTGCCGCCGT CGCGACGGCC GGGGCGTTCG CCGCCGACCC CGAGGCGACC
GCGCCCTCGC CGGCCGCCTA CGACGACGTG GTCGAACTCG GGCTCTCCTC GGAAACGGAC
GCGCTGATGG CGGGGTCGGC GAGGGTGCCG CGGACGCAGG TCTTCTACTC GCAGCTCCAG
TACGTCGTCG GGTACAACGG CGTCGAATCG TTCGCGGCGA CGCTGGACGA CGGTCGAACC
GAACGCCAGT TCGGCTACCC GATCGCCGCC TACGTCGAGA CGTTCGACGG CGCCCGACCG
GGGACGATCG AGACCGGGCT GTTCGCAGCC GAGTCCGCCG GCGAGTGGAC GCCGGCGGCG
GAGGCGACCT ACGTCGTCGG GAGCGACGCC CGGAGCCCGG CGGGCGAGAC GGTCGTCCCG
TTCCGCGAAC GGGGTGCCGC CGAGGCGTTC GCCGCCGACC ACGGCGGACG AGCGGTCGAC
TGGGAGACGG TCCGAAGCCG GTCGTTCGAT ACGGACTCCG CGGCGACGGT GCGCGCGATG
GCCCCCGAGC GCTGGGCCGG AGCAGACGGC CGGATCGCGG CCGCCGAGCG CCGCGCCGAC
AGACCGGTCT CGGTCGTCGT CGGGGAGGAC GCGCCGACGA TCGAGGCGGC GGTCGCGGCC
GCGCCGGCGA ACACGACCGT CGTCGTCCCG CCGGGGACCT ACGAGGAGAC TCTGACGGTG
AACGAGTCGG TCACGATCGC CGGTGAAGAC GCACAGATCA GCGGTGACGG CGACGGGTCG
GTGATCACGG TGCGGGCGCC GGACGTGGCG CTCACCGGAC TCGCGGTCGA CGGGAGCGGA
GGACAGACCC GCGATCCGGA GGCGGCGCGC GAGGGTCGCG CAGACGACGG TGGGGTCAAC
GGTTCGGACG ACGGCGAGGT GTGGGACACC AACATCCAAC TCGGCTACGG TCACGGCGAT
GCCGGGATCC GCGCGATCGG CGCACCGGGA CTCGTCGTCG ACGACGTGAC GGTCGAGGCG
AACGCGAGCG GGCTGCTCCT CCGGGAGGGC TCTCACGCGG TCGTCCGCGA CCTCCGAGTC
GACGGGGCGG ATAGCTGGCA GGACGGCTTC ATGGGAATCG CGGGGATGGG GTCGCGAGTG
ACGGTGACCG ACAGCGCGTT CGAGGGCGGC CGCGACGGGA TCTACCTCCA CCGTGCCGAC
GGCTCGGTCG TCCGGAACTC CACGTTCACC GACAATCGGT ACGGGACGCA CCTCATGTAC
ACGGGCGACG CGCTGATCGC CGACAACGCG TTCCGCAACG AGCTGTTCGG CGGGATCACG
GTGATGACCC GTCCCTCGGG CAACGCGATC GTCGGCAACG ACGTGCGGAA CTCCAGCGCG
GGGGTGCAGG CGTCTGGTAC CCGGACGTAC GTCGGGTACA ACACGCTCGT CGGCAACGAA
CTCGGCTTCT CGACCAGCTC GCGCGGGTCG CTGTACGAGC GCAACGTGGC CGCGAACAAC
GAGCTGGGCG CACGAGCGAC CACGGTCGTC CCGTCGAGCC GGATCGTCGC GAACGACTTC
GTCGGCAACG CGGACCACGC GACCGCCGGG GCGGGCGCGC TCCGGGTCTG GGCCGACGGC
GACCGCGGGA ACTACTGGGA GGGGGCAAAC GTCGGGGTCC ACGAGCCCGG CGAGCGAGCG
TACCGCCCGA CCGCCCCGGT CGACGCTGCC CTCCACCGCG AGGTCGCCGC GGTCGCCGTG
CGCGAGTCGC CCGCGGTCGC CCTCCTCGAC CGACTCCGGG GGACCGTTCC CGGGGCGCGC
TCGGGGAGCA TCATCGATCC GGCGCCGGCG GCGGAGCCGT ACTCGCCGGA CCGGATCGAC
GCCGCGCTCG ACCCGGACGC GGGACCGGTC CGTGCCGACT GGCGCGCCGA ACTGGGCGAC
GGTAGCGGAG AGAGCGACGA GGACGCAGCA ATGAACGCAC ACGATCGGAA CGCGACGAGC
GGGGGTATCG GGCCGAGACC GCAGCGATCT GACCGGACGA CGGTGCCGAC TGTCGAGGGA
GCGACCGCCT CGATTCGGGG TGTCAGCGAT GCCTGA
 
Protein sequence
MTRFDPYGDL PRALRIALVA LLLVAAVATA GAFAADPEAT APSPAAYDDV VELGLSSETD 
ALMAGSARVP RTQVFYSQLQ YVVGYNGVES FAATLDDGRT ERQFGYPIAA YVETFDGARP
GTIETGLFAA ESAGEWTPAA EATYVVGSDA RSPAGETVVP FRERGAAEAF AADHGGRAVD
WETVRSRSFD TDSAATVRAM APERWAGADG RIAAAERRAD RPVSVVVGED APTIEAAVAA
APANTTVVVP PGTYEETLTV NESVTIAGED AQISGDGDGS VITVRAPDVA LTGLAVDGSG
GQTRDPEAAR EGRADDGGVN GSDDGEVWDT NIQLGYGHGD AGIRAIGAPG LVVDDVTVEA
NASGLLLREG SHAVVRDLRV DGADSWQDGF MGIAGMGSRV TVTDSAFEGG RDGIYLHRAD
GSVVRNSTFT DNRYGTHLMY TGDALIADNA FRNELFGGIT VMTRPSGNAI VGNDVRNSSA
GVQASGTRTY VGYNTLVGNE LGFSTSSRGS LYERNVAANN ELGARATTVV PSSRIVANDF
VGNADHATAG AGALRVWADG DRGNYWEGAN VGVHEPGERA YRPTAPVDAA LHREVAAVAV
RESPAVALLD RLRGTVPGAR SGSIIDPAPA AEPYSPDRID AALDPDAGPV RADWRAELGD
GSGESDEDAA MNAHDRNATS GGIGPRPQRS DRTTVPTVEG ATASIRGVSD A