| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4069 |
|---|
| Symbol | |
|---|
| ID | 5871869 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 4522118 |
|---|
| End bp | 4523590 |
|---|
| Gene Length | 1473 bp |
|---|
| Protein Length | 490 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641549197 |
|---|
| Product | parallel beta-helix repeat-containing protein |
|---|
| Protein accession | YP_001670295 |
|---|
| Protein GI | 167035064 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3420] Nitrous oxidase accessory protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTTGA TGCCTGCGCT GGTGGCCTTG CTGCCACTGC TCCCCTTGCC CACCCTGGCC
GCCGCACCGG CCAGCCCCGA AACCCTGCGT GTCGAGCGTT ATGCCGACGA CGGCCAACCC
GGCTCGCTGC GCTGGGCCAT CGAAACCAGC AACCAGAACC CAGGCCACTA CCGCATCGAT
ATTGCGGCCG TGGGCAAGCC GCCCTATGTC ATCCGCCCCA GCCGTGCACT GCCGGAAATC
AAAGGCCCGG TACGTATCAC CGGCCTGTCC TGGGCACAAA ACGGCCAATA CATCGCCATC
GACGGCTCGG CCTACATCAA GGACCAGGGC GTACACACCT GCCCCGGCGC CCTGCCCGGC
CAGTTCGGCA CCAACGTGCG CACCACCACC AACCCCGGGC TGGTGCTGCG TGACACCCAG
GGCGTGCACC TGAGCGGCCT GGAAGTGCGC AATTTCTGCA TCGGCATCCT GGTCAACCGC
GCAAGCTACA ACGTGATCGA AGACAACCGC ATCGTCGCCA ACAAGGGCGG CGCGGGCATC
ATGCTGACCG GCGACGACGG CGCCGGTAAC CCCACCGCCA CCACCACGAA CAACAACAAG
GTGCTGCGCA ACCAGCTGAT CGACAACGGC GACGGCCTGG AGCTGACCCG CGGTGCGGCG
TTCAACCTGG TGGCCGACAA CCTGTTCCGC TCCACCGCAG CCAACCCTGA GCCCTCCCAA
GGCATCGAGA TTCTGCTGGG CAACGACAAC AGCGTGGTGC GCAACCGGTT CGAAAACTAC
TCCGACGGCC TGCAGATCAA CTGGGGCAAG CGCAATTACC TGGCGGCCAA TACCTTCAGC
GGTAACTCGA TCGGCGTCAG CGTCACCGGC GAGGGCAACA TCCTCGACGG CAACCTGATC
CACGGCAACC GCATCGGCGT GGCCCTACGC CCGGAGCCGG ACATTACCGC CACGCGCCTG
AGCGCCAACC GCATCTGGGG TAACAGCCAG GACATCCGCC GCTGCGAGGC CGGCGGTTCA
TGCGTGCCCG ACCAGCGCAC CGGCGCCATC GTGTTTGGCG TGCCGGCCCA GGCGCATGCG
CTGTATGTGG GGTCGCGTGG GGTGGGGGCC GACCTTGCCA AGCAAGACCA GGCGATCATC
TGCGATGCCA AGGGCGAGCC CAAGCCTTGC CAGCCGCTAC CCAACCATAA CCAGCAGGCA
CCACGGCTGT TAGCGCTGGA AGGCAATGTG TTGCGTGGAG AAGTGCAGGG GCCGGCGTCG
AGCCTGCTGC GGGTGGAGTT CTTTGGCAAT GCCGAGGCCG ATGGCACCGA GGCGCAGCAG
TACCTTGGGG ACGTGCTGGT GAACAGCGAC CCGCAGGGCG AGGCGCGGTT TGCGCAGGTG
TTGGAGAATA TGGGCGAGTT GCGCAGCTTT ACTGCGACGG TGACCACTGC CGATGGGGCA
ACTTCTGAAT TGAGCCCGCC GGTTCGCCGG TGA
|
|---|
| Protein sequence | MRLMPALVAL LPLLPLPTLA AAPASPETLR VERYADDGQP GSLRWAIETS NQNPGHYRID
IAAVGKPPYV IRPSRALPEI KGPVRITGLS WAQNGQYIAI DGSAYIKDQG VHTCPGALPG
QFGTNVRTTT NPGLVLRDTQ GVHLSGLEVR NFCIGILVNR ASYNVIEDNR IVANKGGAGI
MLTGDDGAGN PTATTTNNNK VLRNQLIDNG DGLELTRGAA FNLVADNLFR STAANPEPSQ
GIEILLGNDN SVVRNRFENY SDGLQINWGK RNYLAANTFS GNSIGVSVTG EGNILDGNLI
HGNRIGVALR PEPDITATRL SANRIWGNSQ DIRRCEAGGS CVPDQRTGAI VFGVPAQAHA
LYVGSRGVGA DLAKQDQAII CDAKGEPKPC QPLPNHNQQA PRLLALEGNV LRGEVQGPAS
SLLRVEFFGN AEADGTEAQQ YLGDVLVNSD PQGEARFAQV LENMGELRSF TATVTTADGA
TSELSPPVRR
|
|---|
| |