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12 homologs were found in PanDaTox collection
for query gene
PputGB1_2959
on replicon NC_010322
Organism:
Pseudomonas putida GB-1
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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score
E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010322
PputGB1_2959
hypothetical protein
100
68 aa
142
1e-33
Pseudomonas putida GB-1
Bacteria
normal
0.100097
normal
1
-
NC_010322
PputGB1_1626
hypothetical protein
64.71
68 aa
88.2
3e-17
Pseudomonas putida GB-1
Bacteria
normal
1
normal
1
-
NC_009512
Pput_0038
hypothetical protein
50
68 aa
70.1
0.00000000001
Pseudomonas putida F1
Bacteria
normal
0.229986
hitchhiker
0.0000929827
-
NC_009512
Pput_5027
hypothetical protein
55.36
69 aa
67
0.00000000007
Pseudomonas putida F1
Bacteria
normal
1
normal
1
-
NC_002947
PP_3851
hypothetical protein
58.7
107 aa
62.8
0.000000001
Pseudomonas putida KT2440
Bacteria
hitchhiker
0.00188624
normal
0.510213
-
NC_010322
PputGB1_3386
hypothetical protein
61.7
74 aa
62.4
0.000000002
Pseudomonas putida GB-1
Bacteria
normal
1
hitchhiker
0.000883054
-
NC_009512
Pput_4094
hypothetical protein
57.45
74 aa
60.8
0.000000005
Pseudomonas putida F1
Bacteria
normal
1
normal
1
-
NC_009512
Pput_3356
hypothetical protein
53.19
74 aa
59.3
0.00000002
Pseudomonas putida F1
Bacteria
normal
1
normal
1
-
NC_009512
Pput_0037
hypothetical protein
50
74 aa
52.8
0.000002
Pseudomonas putida F1
Bacteria
normal
0.254213
decreased coverage
0.0000236921
-
NC_009512
Pput_5018
hypothetical protein
42.31
69 aa
47.4
0.00006
Pseudomonas putida F1
Bacteria
normal
1
normal
1
-
NC_009512
Pput_2911
hypothetical protein
52.5
70 aa
44.7
0.0004
Pseudomonas putida F1
Bacteria
normal
1
normal
1
-
NC_009512
Pput_2910
hypothetical protein
57.14
36 aa
42.4
0.002
Pseudomonas putida F1
Bacteria
normal
1
normal
1
-
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