10 homologs were found in PanDaTox collection
for query gene Ppha_2453 on replicon NC_011060
Organism: Pelodictyon phaeoclathratiforme BU-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011060  Ppha_2453  CRISPR-associated protein, Csm2 family  100 
 
 
139 aa  285  2e-76  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.228228  n/a   
 
 
-
 
NC_009767  Rcas_1978  CRISPR-associated Csm2 family protein  39.45 
 
 
160 aa  69.7  0.00000000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.299582 
 
 
-
 
NC_009486  Tpet_1096  CRISPR-associated Csm2 family protein  31.97 
 
 
140 aa  54.7  0.0000004  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_1010  CRISPR-associated Csm2 family protein  32.23 
 
 
140 aa  54.7  0.0000004  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_3444  CRISPR-associated protein, Csm2 family  30.77 
 
 
152 aa  52  0.000003  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.728127  normal  0.557207 
 
 
-
 
NC_009972  Haur_2476  CRISPR-associated Csm2 family protein  28.57 
 
 
144 aa  48.9  0.00002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009635  Maeo_1082  CRISPR-associated Csm2 family protein  27.03 
 
 
166 aa  47.4  0.00007  Methanococcus aeolicus Nankai-3  Archaea  normal  0.602864  n/a   
 
 
-
 
NC_013926  Aboo_1027  CRISPR-associated protein, Csm2 family  31.68 
 
 
147 aa  43.9  0.0008  Aciduliprofundum boonei T469  Archaea  hitchhiker  0.000000639731  n/a   
 
 
-
 
NC_010831  Cphamn1_1253  CRISPR-associated protein, Csm2 family  25.6 
 
 
141 aa  42.4  0.002  Chlorobium phaeobacteroides BS1  Bacteria  normal  hitchhiker  0.00304119 
 
 
-
 
NC_009943  Dole_0743  CRISPR-associated Csm2 family protein  26.13 
 
 
164 aa  41.6  0.004  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
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