Gene Cagg_3444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3444 
Symbol 
ID7269669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp4185534 
End bp4185992 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content53% 
IMG OID643568254 
ProductCRISPR-associated protein, Csm2 family 
Protein accessionYP_002464722 
Protein GI219850289 
COG category[L] Replication, recombination and repair 
COG ID[COG1421] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR01870] CRISPR-associated protein, Csm2 family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.728127 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.557207 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAATC GTCCGTCGTC GGGTGAGCAA CGCGAGTCGG TGTCAATCAG CGCGATCAGT 
TCGGAAAATC TGCAAAAGAT CCTTGGTGGC AATACTCCCG AGGCAATCAA TTTGCTGATC
GAAGAAGCTG ATCGGCTAGG CAGAGCATTG AAGGAGAAGA ATTTGACCAC CTCGCAGATC
CGCAACATTT TTGGTGAGGT CCGCTCGATT GAGCAAGAGG TGCGGGTTGG TACCGAGAAG
TTACCGCTTT CCGTTCAGCG CCGTTTACTC ATGCTCAAAC CAAAGATGGC GTATCAGGTC
GGACGCTTCG GTAACAATCA AGCGTTGAGG GCCTTGGTCG AGACGCTCTC AGCAGCCATT
GACCGGGTTG GTGATGATGT CGGACGGTTT CACACGTTTG TCGATCTGTT CGAGGCTATT
CTCGCTTACC ACCGTTTCTA CGGCGGTCGC GCCAATTAG
 
Protein sequence
MMNRPSSGEQ RESVSISAIS SENLQKILGG NTPEAINLLI EEADRLGRAL KEKNLTTSQI 
RNIFGEVRSI EQEVRVGTEK LPLSVQRRLL MLKPKMAYQV GRFGNNQALR ALVETLSAAI
DRVGDDVGRF HTFVDLFEAI LAYHRFYGGR AN