Gene TRQ2_1010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_1010 
Symbol 
ID6092440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand+ 
Start bp1056034 
End bp1056456 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content41% 
IMG OID642488206 
ProductCRISPR-associated Csm2 family protein 
Protein accessionYP_001739043 
Protein GI170288805 
COG category[L] Replication, recombination and repair 
COG ID[COG1421] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR01870] CRISPR-associated protein, Csm2 family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCAGTTT CTCAGGGTGT TTCTCTCAAA GAAGATTTGA AGGACCTTGT GAGAAAGGCA 
GAGAAAATCG GAAGGGAACT TTCTGGAAAG CTGAAGACAA ACCAGCTCAG AAAGTTTCAT 
GGTCACTTAA CCAAAATCTG GAGCAACTAC ATCTACAAAA AGAAGGACTA CAGGGATAAC 
CCGGAGAAGT TCAACGAAGA GATCCTTAAC GAGCTTCACT TCATGAAGAT ATTTCTCGCA 
TATCAGGTTG GAAGGGATAT CGAAGGTATC AGTGAATTGA AGGAGATACT TGAACCTCTC 
ATAGACGAGA TAAAGACTCC TGACGAGTTT GAGAAATTCA AAAAGTTCTA CGATGCAATC 
CTTGCGTATC ACAAATTCCA TTCTGAATCC GAAAAAAGCA ACAGAAGGAC AGCCAGAAGA 
TAA
 
Protein sequence
MAVSQGVSLK EDLKDLVRKA EKIGRELSGK LKTNQLRKFH GHLTKIWSNY IYKKKDYRDN 
PEKFNEEILN ELHFMKIFLA YQVGRDIEGI SELKEILEPL IDEIKTPDEF EKFKKFYDAI 
LAYHKFHSES EKSNRRTARR