Gene Cphamn1_1253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1253 
Symbol 
ID6374930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1359334 
End bp1359759 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content38% 
IMG OID642683751 
ProductCRISPR-associated protein, Csm2 family 
Protein accessionYP_001959666 
Protein GI189500196 
COG category 
COG ID 
TIGRFAM ID[TIGR01870] CRISPR-associated protein, Csm2 family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00304119 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTGAAC AAAATGGTGA TAAGTCGGCA TATGAAAGGG AGAAAGAATT AAGGTCAAAA 
TTAACAGATA CTTTTGTTCT GGATTATACT CCTGAAACGT ATCAGGCGAT GATTGATACC
GTGAAGGAGT ATAGCGGAAT ACTGGTTTCT GGAAAATATG CCATTACGAC GACACAGCTT
CGGAATATTT ATACTTCAGT GAAGAAAGCA AAGAAGCCGA AAGAGCTTCT TCCGTTGCAG
GTAAGATTGG CTTATCTGGC TGGAAGAAAC GAGTCAAATC CCAGATTTAA AGCATTGGCA
GACACGTTGT CTTTGTTGAT CAGAAAGGTG AAGACCGAAA CTCAATTGGA GCATTTTACT
GAGTTTTTTA CCGCTTTGAT CGCTTATCAG AAATACCATG AGAAGTTCTC ATCTAAAAAA
CATTAA
 
Protein sequence
MSEQNGDKSA YEREKELRSK LTDTFVLDYT PETYQAMIDT VKEYSGILVS GKYAITTTQL 
RNIYTSVKKA KKPKELLPLQ VRLAYLAGRN ESNPRFKALA DTLSLLIRKV KTETQLEHFT
EFFTALIAYQ KYHEKFSSKK H