| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1978 |
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| Symbol | |
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| ID | 5539456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2534514 |
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| End bp | 2534996 |
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| Gene Length | 483 bp |
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| Protein Length | 160 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640894113 |
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| Product | CRISPR-associated Csm2 family protein |
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| Protein accession | YP_001432084 |
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| Protein GI | 156741955 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1421] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR01870] CRISPR-associated protein, Csm2 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.299582 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAATC CACGGAGCGA ACAACGACTC ACGGGCGACC AGCTGGCGCA GGAACTGGCG
CCGCAGGAGA CGCTTAAGCG GATCATTACC GAAGACACGA CGGAGTCGAT CCAGGCATTG
ACGGCAACTG CTGAGCGGAT TGGCAGCCGT CTCGCGCGTG ATGTCACCAC GTCGCAGATC
CGCAACATCT TCGGCACGGT GCGCGCAATT GAGCAGGACG TCAAAACCAT TGATGATGAC
AGACCATTGC CGCTCCCCGT GCAGCGCGAG TTGCAGATGC TGCGCCCCAA ACTCGCCTAT
CAGTATGGGC GCGTCCAGGG GCGCGACGAT GATCCGGGCA AGGCGGCAAT GGGCGCTCTG
ACGAAGATTC TGTCGGACTC CATCGGTCTC GTGGGCGCGG ATACCCGTCG CTTCCGCAAT
TTCGTCGATT TTTTCGAGGC TATTCTTGCC TACCATCGTC GCTACGGCGG TCGCACCAAC
TGA
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| Protein sequence | MSNPRSEQRL TGDQLAQELA PQETLKRIIT EDTTESIQAL TATAERIGSR LARDVTTSQI
RNIFGTVRAI EQDVKTIDDD RPLPLPVQRE LQMLRPKLAY QYGRVQGRDD DPGKAAMGAL
TKILSDSIGL VGADTRRFRN FVDFFEAILA YHRRYGGRTN
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