8 homologs were found in PanDaTox collection
for query gene Ppha_0297 on replicon NC_011060
Organism: Pelodictyon phaeoclathratiforme BU-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011060  Ppha_0297  50S ribosomal protein L29  100 
 
 
68 aa  139  1.9999999999999998e-32  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_2415  50S ribosomal protein L29  76.92 
 
 
68 aa  110  7.000000000000001e-24  Chlorobium phaeobacteroides DSM 266  Bacteria  hitchhiker  0.00000251007  n/a   
 
 
-
 
NC_007514  Cag_1843  50S ribosomal protein L29  76.56 
 
 
65 aa  108  2.0000000000000002e-23  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.177502  n/a   
 
 
-
 
NC_007512  Plut_0189  50S ribosomal protein L29  76.56 
 
 
68 aa  107  5e-23  Chlorobium luteolum DSM 273  Bacteria  hitchhiker  0.00253702  normal 
 
 
-
 
NC_010803  Clim_2221  50S ribosomal protein L29  74.63 
 
 
68 aa  105  1e-22  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.000000000475867  n/a   
 
 
-
 
NC_011059  Paes_2056  50S ribosomal protein L29  69.23 
 
 
68 aa  98.2  3e-20  Prosthecochloris aestuarii DSM 271  Bacteria  hitchhiker  0.000676986  normal  0.393938 
 
 
-
 
NC_010831  Cphamn1_2288  50S ribosomal protein L29  68.33 
 
 
68 aa  89.7  1e-17  Chlorobium phaeobacteroides BS1  Bacteria  unclonable  0.0000000110804  hitchhiker  0.00284339 
 
 
-
 
NC_013501  Rmar_0850  ribosomal protein L29  38.18 
 
 
71 aa  41.6  0.004  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
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