8 homologs were found in PanDaTox collection
for query gene Pnuc_0865 on replicon NC_009379
Organism: Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009379  Pnuc_0865  XRE family transcriptional regulator  100 
 
 		 113 aa  218  3e-56  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007908  Rfer_3066  XRE family transcriptional regulator  54.87 
 
 		 113 aa  124  4.0000000000000003e-28  Rhodoferax ferrireducens T118  Bacteria  normal  0.870694  n/a   
 
 
-
 
NC_008757  Pnap_4339  XRE family transcriptional regulator  54.41 
 
 		 94 aa  67.8  0.00000000005  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  0.69117 
 
 
-
 
NC_007406  Nwi_2078  XRE family transcriptional regulator  55.56 
 
 		 126 aa  45.8  0.0002  Nitrobacter winogradskyi Nb-255  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008825  Mpe_A0785  hypothetical protein  42.86 
 
 		 166 aa  42.4  0.002  Methylibium petroleiphilum PM1  Bacteria  hitchhiker  0.00156386  normal  1 
 
 
-
 
NC_002939  GSU2398  hypothetical protein  41.38 
 
 		 80 aa  42  0.003  Geobacter sulfurreducens PCA  Bacteria  normal  0.550946  n/a   
 
 
-
 
NC_010814  Glov_0190  transcriptional regulator, XRE family  31 
 
 		 112 aa  40.8  0.007  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_010002  Daci_2319  XRE family transcriptional regulator  43.75 
 
 		 228 aa  40  0.01  Delftia acidovorans SPH-1  Bacteria  normal  0.288377  normal  0.478428 
 
 
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