| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0785 |
|---|
| Symbol | |
|---|
| ID | 4784469 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 820805 |
|---|
| End bp | 821305 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640089346 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001019982 |
|---|
| Protein GI | 124265978 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00156386 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATAGAA TGAGATTCAT AATGCCAGCC AAAGCACCTC CTGTCGGCGA ACTTCTCGCC
ACCCGGCTAC AGGCCCTGGG GGAGCGCATT CGCGCCCACC GTGGACGCCA GAAAGTCAGC
GCTACAGTGG CCGCGGAAGC CGCGGGCATG TCCCGGGTGA CCTGGCACCG CATCGAACGG
GGCGAGCCTT CCGTGACCAT GGGTGCCTAC CTCAGCGCCA TCGACGCGAT CGGGTTGCAA
CTGGAGCTTC GCGATCCGCA GGCCCGCCCG GCCACTGCCG ACAGGGCCAG CCTGCCGGAG
CGTGTGCGGC TGGGCGATTT TCCCCAGCTC AAGCGCCTGG CCTGGCAACT GCACGACGTC
GAAGAACTCA GCCCGGTGGA TGCCTTGAAC CTGTACGAGC GCAACTGGCG TCACATCGAC
CGAGCCCGTA TGGAGCCGGC CGAGCGTGCA CTGCTCCAAG TCCTGGTGGA CCAACTCGGC
GGGGGGCGCC TGCTTGTTTG A
|
|---|
| Protein sequence | MYRMRFIMPA KAPPVGELLA TRLQALGERI RAHRGRQKVS ATVAAEAAGM SRVTWHRIER
GEPSVTMGAY LSAIDAIGLQ LELRDPQARP ATADRASLPE RVRLGDFPQL KRLAWQLHDV
EELSPVDALN LYERNWRHID RARMEPAERA LLQVLVDQLG GGRLLV
|
|---|
| |