Gene Pnuc_0865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0865 
Symbol 
ID5054017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp859507 
End bp859848 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content51% 
IMG OID640471025 
ProductXRE family transcriptional regulator 
Protein accessionYP_001155647 
Protein GI145589050 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGTAG ATCAAGAACT GACCCTAGCA TCAAAGCAAC TTGGCCAATC CGCTGAAATA 
GCGCAATGCC TTGTTTCTTT GCGTCTTGCG CGTCGTGTTC GCCAAGGTGA AGCAGCAGTC 
CGTGCCGGCC TATCTCGCGC TACTGCACAG CGCATTGAAA AGGGTGATCC TGGTGTAGCC 
ATTGGCGCGC TCTTGCGTTA CTTAGATGCA ATTGCTCCAG GCATGAACTT ATTGCAACTA 
TTAAGCGGAG ATGATCCTGC GATCATTGCT TTAGAGCGTC GCTCACGTCC ACAACGCGTG 
CGTGATTTAA GTGCAGCGGA AATGAAAGCG CTTGATTTCT GA
 
Protein sequence
MRVDQELTLA SKQLGQSAEI AQCLVSLRLA RRVRQGEAAV RAGLSRATAQ RIEKGDPGVA 
IGALLRYLDA IAPGMNLLQL LSGDDPAIIA LERRSRPQRV RDLSAAEMKA LDF