15 homologs were found in PanDaTox collection
for query gene Plim_2012 on replicon NC_014148
Organism: Planctomyces limnophilus DSM 3776



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_014148  Plim_2012  DNA binding domain protein, excisionase family  100 
 
 		 72 aa  148  2e-35  Planctomyces limnophilus DSM 3776  Bacteria  normal  1  n/a   
 
 
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NC_014148  Plim_2648  Prophage CP4-57 regulatory  47.62 
 
 		 93 aa  60.5  0.000000009  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.395704  n/a   
 
 
-
 
NC_008346  Swol_1557  molybdate-binding protein  42 
 
 		 317 aa  44.3  0.0006  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  1  n/a   
 
 
-
 
NC_011886  Achl_3099  excision promoter, Xis  43.18 
 
 		 70 aa  43.5  0.001  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  1 
 
 
-
 
NC_008541  Arth_3301  phage transcriptional regulator, AlpA  39.13 
 
 		 84 aa  42.4  0.002  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_0537  hypothetical protein  40.32 
 
 		 67 aa  42.4  0.002  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008321  Shewmr4_2780  phage transcriptional regulator, AlpA  36.36 
 
 		 57 aa  42  0.003  Shewanella sp. MR-4  Bacteria  normal  0.0923797  normal  0.386289 
 
 
-
 
NC_008699  Noca_0484  DNA binding domain-containing protein  38.89 
 
 		 67 aa  42  0.003  Nocardioides sp. JS614  Bacteria  normal  0.111356  n/a   
 
 
-
 
NC_014148  Plim_1224  hypothetical protein  38.33 
 
 		 83 aa  41.6  0.003  Planctomyces limnophilus DSM 3776  Bacteria  normal  1  n/a   
 
 
-
 
NC_013517  Sterm_1158  DNA binding domain protein, excisionase family  31.75 
 
 		 320 aa  41.2  0.004  Sebaldella termitidis ATCC 33386  Bacteria  unclonable  0.000000000597249  n/a   
 
 
-
 
NC_009783  VIBHAR_01114  hypothetical protein  37.25 
 
 		 56 aa  41.2  0.005  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
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NC_014165  Tbis_0251  excisionase family DNA binding domain-containing protein  40.32 
 
 		 67 aa  41.2  0.005  Thermobispora bispora DSM 43833  Bacteria  normal  0.23187  normal  1 
 
 
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NC_009457  VC0395_A1406  putative transcriptional regulator  31.15 
 
 		 76 aa  40.8  0.006  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
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NC_009664  Krad_0612  phage transcriptional regulator, AlpA  42.86 
 
 		 66 aa  40.4  0.009  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.274045  normal  0.0916726 
 
 
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NC_013530  Xcel_1568  phage transcriptional regulator, AlpA  34 
 
 		 78 aa  40  0.01  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
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