| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2780 |
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| Symbol | |
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| ID | 4253351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3329622 |
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| End bp | 3329795 |
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| Gene Length | 174 bp |
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| Protein Length | 57 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638119415 |
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| Product | phage transcriptional regulator, AlpA |
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| Protein accession | YP_734908 |
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| Protein GI | 113971115 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01764] DNA binding domain, excisionase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0923797 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.386289 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTGAAC AAATTTTAAC CTTGAAAGAG GTTGCCACTT ATCTAAAGGT GGCTGAAAAA
ACGGCTTATA GACTTGCAAG CGAAGGCAAA CTACCAGGCT TTAAGGTTGG CGGCTCTTGG
CGCTTTAAAA AAGACGACTT AGAAAAGTGG ATAGAGCACG CAAAGCGCAA TTAG
|
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| Protein sequence | MTEQILTLKE VATYLKVAEK TAYRLASEGK LPGFKVGGSW RFKKDDLEKW IEHAKRN
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