Gene VC0395_A1406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1406 
Symbol 
ID5137349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp1505734 
End bp1505964 
Gene Length231 bp 
Protein Length76 aa 
Translation table11 
GC content47% 
IMG OID640532864 
Productputative transcriptional regulator 
Protein accessionYP_001217349 
Protein GI147675012 
COG category[K] Transcription 
COG ID[COG3311] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAACTAA CCAACCTGAG AGGTGTGAAT ATGCCAGAGA ACAACATTCG TTTGATCCGC 
TTTCGAGAAG TGCTAACTAT GACTGGTTTG TCACGCTCTA GTTTGTACCG ATTTATTGAA
GAAAACCAAT TCCCGCCCCA AGTTCAACTG GGTGGTCGTG CTGTAGCTTG GGTAGAAGGC
GAGGTGCAGG AGTGGATTGC TCAACGGATC ACCAATCGTC GAATGGATTA G
 
Protein sequence
MQLTNLRGVN MPENNIRLIR FREVLTMTGL SRSSLYRFIE ENQFPPQVQL GGRAVAWVEG 
EVQEWIAQRI TNRRMD