10 homologs were found in PanDaTox collection
for query gene Pfl01_4302 on replicon NC_007492
Organism: Pseudomonas fluorescens Pf0-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007492  Pfl01_4302  hypothetical protein  100 
 
 		 105 aa  216  6e-56  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  0.966259 
 
 
-
 
NC_008254  Meso_0528  XRE family transcriptional regulator  39.66 
 
 		 87 aa  42.4  0.002  Chelativorans sp. BNC1  Bacteria  normal  0.16172  n/a   
 
 
-
 
NC_010505  Mrad2831_1230  helix-turn-helix domain-containing protein  36.71 
 
 		 85 aa  42.4  0.002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010725  Mpop_0916  putative transcriptional regulator, XRE family  37.5 
 
 		 108 aa  41.6  0.004  Methylobacterium populi BJ001  Bacteria  normal  1  normal  0.607361 
 
 
-
 
NC_011366  Rleg2_5911  putative transcriptional regulator, XRE family  32.39 
 
 		 105 aa  41.2  0.004  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  0.432156 
 
 
-
 
NC_007643  Rru_A2280  hypothetical protein  33.33 
 
 		 75 aa  41.2  0.005  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_010172  Mext_2449  hypothetical protein  32.35 
 
 		 88 aa  41.2  0.005  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008686  Pden_1517  XRE family transcriptional regulator  33.87 
 
 		 85 aa  40.8  0.007  Paracoccus denitrificans PD1222  Bacteria  normal  0.788491  normal  0.176287 
 
 
-
 
NC_010725  Mpop_3594  putative PAS/PAC sensor protein  36.51 
 
 		 361 aa  40.4  0.008  Methylobacterium populi BJ001  Bacteria  normal  0.419361  normal  0.346038 
 
 
-
 
NC_012858  Rleg_6881  transcriptional regulator, XRE family  29.63 
 
 		 106 aa  40.4  0.009  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.879707  normal  0.858405 
 
 
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